Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB5BP61020 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
RAB5BP61020 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB5BP61020 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB5BP61020 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.24□□□□□ -0.29
RAB5BP61020 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB5BP61020 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.24□□□□□ -0.29
RAB5BP61020 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB5BP61020 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB5BP61020 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RAB5BP61020 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
RAB5BP61020 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.23□□□□□ -0.29
RAB5BP61020 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RAB5BP61020 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RAB5BP61020 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RAB5BP61020 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 REXO1L11P-201ENST00000620964 1927 ntBASIC13.23□□□□□ -0.29
RAB5BP61020 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RAB5BP61020 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RAB5BP61020 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RAB5BP61020 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RAB5BP61020 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB5BP61020 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.23□□□□□ -0.29
RAB5BP61020 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB5BP61020 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
RAB5BP61020 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB5BP61020 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.23□□□□□ -0.29
RAB5BP61020 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.23□□□□□ -0.29
RAB5BP61020 MIR939-201ENST00000401314 82 ntBASIC13.23□□□□□ -0.29
RAB5BP61020 KRT19P1-201ENST00000405746 1186 ntBASIC13.23□□□□□ -0.29
RAB5BP61020 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RAB5BP61020 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.23□□□□□ -0.29
RAB5BP61020 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.23□□□□□ -0.29
RAB5BP61020 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.23□□□□□ -0.29
RAB5BP61020 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.23□□□□□ -0.29
RAB5BP61020 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.23□□□□□ -0.29
RAB5BP61020 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RAB5BP61020 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RAB5BP61020 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB5BP61020 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB5BP61020 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
RAB5BP61020 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB5BP61020 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RAB5BP61020 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RAB5BP61020 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 AC232323.1-201ENST00000540724 2099 ntBASIC13.22□□□□□ -0.29
RAB5BP61020 REXO1L5P-201ENST00000622260 2098 ntBASIC13.22□□□□□ -0.29
RAB5BP61020 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB5BP61020 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RAB5BP61020 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RAB5BP61020 AL596087.1-201ENST00000400979 1969 ntBASIC13.22□□□□□ -0.29
RAB5BP61020 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB5BP61020 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.22□□□□□ -0.29
RAB5BP61020 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC13.22□□□□□ -0.29
RAB5BP61020 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.22□□□□□ -0.29
RAB5BP61020 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB5BP61020 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RAB5BP61020 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.22□□□□□ -0.29
RAB5BP61020 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms