Protein–RNA interactions for Protein: P59665

DEFA1, Neutrophil defensin 1, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA1P59665 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
DEFA1P59665 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 DUSP5P2-201ENST00000426873 1033 ntBASIC14.85□□□□□ -0.03
DEFA1P59665 AC004980.1-204ENST00000429707 299 ntBASIC14.85□□□□□ -0.03
DEFA1P59665 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.85□□□□□ -0.03
DEFA1P59665 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.85□□□□□ -0.03
DEFA1P59665 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.85□□□□□ -0.03
DEFA1P59665 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
DEFA1P59665 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.85□□□□□ -0.03
DEFA1P59665 AC133552.2-202ENST00000575694 574 ntBASIC14.85□□□□□ -0.03
DEFA1P59665 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.85□□□□□ -0.03
DEFA1P59665 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.85□□□□□ -0.03
DEFA1P59665 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
DEFA1P59665 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.85□□□□□ -0.03
DEFA1P59665 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.85□□□□□ -0.03
DEFA1P59665 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.85□□□□□ -0.03
DEFA1P59665 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.85□□□□□ -0.03
DEFA1P59665 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
DEFA1P59665 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
DEFA1P59665 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
DEFA1P59665 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA1P59665 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.85□□□□□ -0.03
DEFA1P59665 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.84□□□□□ -0.03
DEFA1P59665 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
DEFA1P59665 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
DEFA1P59665 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.84□□□□□ -0.03
DEFA1P59665 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
DEFA1P59665 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.84□□□□□ -0.03
DEFA1P59665 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
DEFA1P59665 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.84□□□□□ -0.03
DEFA1P59665 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.84□□□□□ -0.03
DEFA1P59665 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 PNMA6B-201ENST00000538162 1200 ntBASIC14.84□□□□□ -0.03
DEFA1P59665 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.84□□□□□ -0.03
DEFA1P59665 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.84□□□□□ -0.03
DEFA1P59665 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.84□□□□□ -0.03
DEFA1P59665 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
DEFA1P59665 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.84□□□□□ -0.03
DEFA1P59665 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
DEFA1P59665 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
DEFA1P59665 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
DEFA1P59665 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DEFA1P59665 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
DEFA1P59665 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.83□□□□□ -0.03
DEFA1P59665 AL359258.3-201ENST00000622910 2331 ntBASIC14.83□□□□□ -0.03
DEFA1P59665 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
DEFA1P59665 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
DEFA1P59665 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
DEFA1P59665 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
DEFA1P59665 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DEFA1P59665 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
DEFA1P59665 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
DEFA1P59665 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DEFA1P59665 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DEFA1P59665 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
DEFA1P59665 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DEFA1P59665 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
DEFA1P59665 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.83□□□□□ -0.04
DEFA1P59665 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms