Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
PER3P56645 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PER3P56645 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.71■□□□□ 0.1
PER3P56645 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
PER3P56645 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.1
PER3P56645 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.71■□□□□ 0.1
PER3P56645 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PER3P56645 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PER3P56645 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.7■□□□□ 0.1
PER3P56645 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 AL121761.2-201ENST00000598007 1648 ntBASIC15.7■□□□□ 0.1
PER3P56645 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.7■□□□□ 0.1
PER3P56645 COX5BP2-201ENST00000392354 334 ntBASIC15.7■□□□□ 0.1
PER3P56645 SPDYE21P-201ENST00000413323 827 ntBASIC15.7■□□□□ 0.1
PER3P56645 PRSS29P-201ENST00000440800 595 ntBASIC15.7■□□□□ 0.1
PER3P56645 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.7■□□□□ 0.1
PER3P56645 KRT18P2-201ENST00000447938 1258 ntBASIC15.7■□□□□ 0.1
PER3P56645 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.7■□□□□ 0.1
PER3P56645 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.7■□□□□ 0.1
PER3P56645 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.7■□□□□ 0.1
PER3P56645 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.7■□□□□ 0.1
PER3P56645 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.7■□□□□ 0.1
PER3P56645 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
PER3P56645 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.7■□□□□ 0.1
PER3P56645 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 AP001094.4-201ENST00000579008 2176 ntBASIC15.7■□□□□ 0.1
PER3P56645 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.7■□□□□ 0.1
PER3P56645 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.7■□□□□ 0.1
PER3P56645 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PER3P56645 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PER3P56645 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
PER3P56645 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.7■□□□□ 0.1
PER3P56645 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PER3P56645 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.69■□□□□ 0.1
PER3P56645 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.69■□□□□ 0.1
PER3P56645 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.69■□□□□ 0.1
PER3P56645 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.69■□□□□ 0.1
PER3P56645 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.69■□□□□ 0.1
PER3P56645 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.69■□□□□ 0.1
PER3P56645 ACTG1P14-201ENST00000446382 1122 ntBASIC15.69■□□□□ 0.1
PER3P56645 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.69■□□□□ 0.1
PER3P56645 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PER3P56645 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PER3P56645 AL078644.1-201ENST00000609881 752 ntBASIC15.69■□□□□ 0.1
PER3P56645 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.69■□□□□ 0.1
PER3P56645 AC073592.5-201ENST00000624854 528 ntBASIC15.69■□□□□ 0.1
PER3P56645 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PER3P56645 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.69■□□□□ 0.1
PER3P56645 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.69■□□□□ 0.1
PER3P56645 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.69■□□□□ 0.1
PER3P56645 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.69■□□□□ 0.1
PER3P56645 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.68■□□□□ 0.1
PER3P56645 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.68■□□□□ 0.1
PER3P56645 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PER3P56645 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PER3P56645 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PER3P56645 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PER3P56645 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PER3P56645 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PER3P56645 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms