Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.57■□□□□ 0.4
EPHB3P54753 SPDYE7P-202ENST00000420373 878 ntBASIC17.57■□□□□ 0.4
EPHB3P54753 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.57■□□□□ 0.4
EPHB3P54753 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.57■□□□□ 0.4
EPHB3P54753 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EPHB3P54753 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.57■□□□□ 0.4
EPHB3P54753 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 SLC25A39P2-201ENST00000537614 270 ntBASIC17.57■□□□□ 0.4
EPHB3P54753 DUX4L27-201ENST00000554796 1261 ntBASIC17.57■□□□□ 0.4
EPHB3P54753 AC026150.2-201ENST00000564693 1156 ntBASIC17.57■□□□□ 0.4
EPHB3P54753 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
EPHB3P54753 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EPHB3P54753 AC005498.2-205ENST00000593218 784 ntBASIC17.57■□□□□ 0.4
EPHB3P54753 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
EPHB3P54753 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
EPHB3P54753 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
EPHB3P54753 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.57■□□□□ 0.4
EPHB3P54753 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.57■□□□□ 0.4
EPHB3P54753 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
EPHB3P54753 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB3P54753 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.56■□□□□ 0.4
EPHB3P54753 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB3P54753 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
EPHB3P54753 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
EPHB3P54753 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB3P54753 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.56■□□□□ 0.4
EPHB3P54753 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
EPHB3P54753 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB3P54753 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB3P54753 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
EPHB3P54753 BCRP1-201ENST00000444246 691 ntBASIC17.56■□□□□ 0.4
EPHB3P54753 KLF2P3-201ENST00000451977 1087 ntBASIC17.56■□□□□ 0.4
EPHB3P54753 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.56■□□□□ 0.4
EPHB3P54753 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB3P54753 RNA5SP421-201ENST00000516864 134 ntBASIC17.56■□□□□ 0.4
EPHB3P54753 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.56■□□□□ 0.4
EPHB3P54753 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.56■□□□□ 0.4
EPHB3P54753 AC051619.7-201ENST00000568314 623 ntBASIC17.56■□□□□ 0.4
EPHB3P54753 AP000842.3-202ENST00000569238 1080 ntBASIC17.56■□□□□ 0.4
EPHB3P54753 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.56■□□□□ 0.4
EPHB3P54753 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.56■□□□□ 0.4
EPHB3P54753 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB3P54753 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB3P54753 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB3P54753 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB3P54753 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB3P54753 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB3P54753 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB3P54753 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB3P54753 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.55■□□□□ 0.4
EPHB3P54753 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
EPHB3P54753 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.55■□□□□ 0.4
EPHB3P54753 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.55■□□□□ 0.4
EPHB3P54753 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
EPHB3P54753 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
EPHB3P54753 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.55■□□□□ 0.4
EPHB3P54753 KRT18P34-201ENST00000488218 1270 ntBASIC17.55■□□□□ 0.4
EPHB3P54753 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
EPHB3P54753 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.55■□□□□ 0.4
EPHB3P54753 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.55■□□□□ 0.4
EPHB3P54753 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.55■□□□□ 0.4
EPHB3P54753 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.55■□□□□ 0.4
EPHB3P54753 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
EPHB3P54753 AC068880.1-201ENST00000507289 2297 ntBASIC17.55■□□□□ 0.4
EPHB3P54753 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.55■□□□□ 0.4
EPHB3P54753 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
EPHB3P54753 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB3P54753 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
EPHB3P54753 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EPHB3P54753 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EPHB3P54753 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EPHB3P54753 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EPHB3P54753 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms