Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.93■□□□□ 0.14
RFX3P48380 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX3P48380 AL691432.3-201ENST00000621860 400 ntBASIC15.93■□□□□ 0.14
RFX3P48380 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX3P48380 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX3P48380 AC068587.6-202ENST00000641839 5619 ntBASIC15.93■□□□□ 0.14
RFX3P48380 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFX3P48380 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.93■□□□□ 0.14
RFX3P48380 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX3P48380 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX3P48380 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RFX3P48380 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX3P48380 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.93■□□□□ 0.14
RFX3P48380 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX3P48380 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX3P48380 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RFX3P48380 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX3P48380 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RFX3P48380 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX3P48380 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RFX3P48380 AC004870.1-201ENST00000315132 882 ntBASIC15.92■□□□□ 0.14
RFX3P48380 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
RFX3P48380 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.92■□□□□ 0.14
RFX3P48380 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.92■□□□□ 0.14
RFX3P48380 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.92■□□□□ 0.14
RFX3P48380 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.92■□□□□ 0.14
RFX3P48380 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX3P48380 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.92■□□□□ 0.14
RFX3P48380 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RFX3P48380 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
RFX3P48380 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX3P48380 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.92■□□□□ 0.14
RFX3P48380 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
RFX3P48380 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 NCF1C-201ENST00000438382 1427 ntBASIC15.92■□□□□ 0.14
RFX3P48380 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.92■□□□□ 0.14
RFX3P48380 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RFX3P48380 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX3P48380 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX3P48380 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.91■□□□□ 0.14
RFX3P48380 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RFX3P48380 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.91■□□□□ 0.14
RFX3P48380 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX3P48380 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX3P48380 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.91■□□□□ 0.14
RFX3P48380 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFX3P48380 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX3P48380 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RFX3P48380 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.91■□□□□ 0.14
RFX3P48380 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX3P48380 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.91■□□□□ 0.14
RFX3P48380 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RFX3P48380 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.91■□□□□ 0.14
RFX3P48380 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.91■□□□□ 0.14
RFX3P48380 AC005915.1-201ENST00000624912 2018 ntBASIC15.91■□□□□ 0.14
RFX3P48380 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFX3P48380 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.91■□□□□ 0.14
RFX3P48380 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX3P48380 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFX3P48380 ACTG1P4-201ENST00000425123 1122 ntBASIC15.91■□□□□ 0.14
RFX3P48380 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RFX3P48380 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.91■□□□□ 0.14
RFX3P48380 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.91■□□□□ 0.14
RFX3P48380 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.91■□□□□ 0.14
RFX3P48380 AC073648.2-201ENST00000510116 352 ntBASIC15.91■□□□□ 0.14
RFX3P48380 KRT126P-201ENST00000549467 1181 ntBASIC15.91■□□□□ 0.14
RFX3P48380 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.91■□□□□ 0.14
RFX3P48380 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.91■□□□□ 0.14
RFX3P48380 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RFX3P48380 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX3P48380 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RFX3P48380 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.91■□□□□ 0.14
RFX3P48380 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFX3P48380 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.91■□□□□ 0.14
RFX3P48380 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.91■□□□□ 0.14
RFX3P48380 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX3P48380 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX3P48380 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RFX3P48380 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX3P48380 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX3P48380 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.91■□□□□ 0.14
RFX3P48380 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.91■□□□□ 0.14
RFX3P48380 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX3P48380 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX3P48380 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms