Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL079307.3-201ENST00000556114 283 ntBASIC16.67■□□□□ 0.26
CXCL12P48061 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.67■□□□□ 0.26
CXCL12P48061 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.67■□□□□ 0.26
CXCL12P48061 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.67■□□□□ 0.26
CXCL12P48061 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.67■□□□□ 0.26
CXCL12P48061 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.67■□□□□ 0.26
CXCL12P48061 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.67■□□□□ 0.26
CXCL12P48061 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL12P48061 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL12P48061 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL12P48061 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL12P48061 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CXCL12P48061 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.67■□□□□ 0.26
CXCL12P48061 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CXCL12P48061 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL12P48061 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL12P48061 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL12P48061 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL12P48061 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CXCL12P48061 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CXCL12P48061 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.66■□□□□ 0.26
CXCL12P48061 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL12P48061 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL12P48061 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL12P48061 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL12P48061 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CXCL12P48061 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CXCL12P48061 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CXCL12P48061 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL12P48061 AC012317.2-201ENST00000623305 2251 ntBASIC16.66■□□□□ 0.26
CXCL12P48061 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL12P48061 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL12P48061 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.66■□□□□ 0.26
CXCL12P48061 SPDYE19P-201ENST00000338590 713 ntBASIC16.66■□□□□ 0.26
CXCL12P48061 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL12P48061 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL12P48061 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CXCL12P48061 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.66■□□□□ 0.26
CXCL12P48061 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL12P48061 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.66■□□□□ 0.26
CXCL12P48061 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.66■□□□□ 0.26
CXCL12P48061 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CXCL12P48061 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CXCL12P48061 AC093004.1-201ENST00000508850 424 ntBASIC16.66■□□□□ 0.26
CXCL12P48061 DOC2GP-202ENST00000514950 1163 ntBASIC16.66■□□□□ 0.26
CXCL12P48061 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.66■□□□□ 0.26
CXCL12P48061 ZNF890P-202ENST00000530367 1156 ntBASIC16.66■□□□□ 0.26
CXCL12P48061 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.66■□□□□ 0.26
CXCL12P48061 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.66■□□□□ 0.26
CXCL12P48061 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
CXCL12P48061 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CXCL12P48061 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.66■□□□□ 0.26
CXCL12P48061 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CXCL12P48061 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CXCL12P48061 AC106886.1-201ENST00000568660 600 ntBASIC16.66■□□□□ 0.26
CXCL12P48061 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CXCL12P48061 AC008494.3-201ENST00000606615 944 ntBASIC16.66■□□□□ 0.26
CXCL12P48061 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.66■□□□□ 0.26
CXCL12P48061 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL12P48061 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.66■□□□□ 0.26
CXCL12P48061 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CXCL12P48061 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CXCL12P48061 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.65■□□□□ 0.26
CXCL12P48061 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.65■□□□□ 0.26
CXCL12P48061 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 AC093525.9-201ENST00000624961 1746 ntBASIC16.65■□□□□ 0.26
CXCL12P48061 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.65■□□□□ 0.26
CXCL12P48061 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CXCL12P48061 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.65■□□□□ 0.26
CXCL12P48061 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 RN7SL618P-201ENST00000477850 296 ntBASIC16.65■□□□□ 0.26
CXCL12P48061 RNA5SP410-201ENST00000516285 106 ntBASIC16.65■□□□□ 0.26
CXCL12P48061 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.65■□□□□ 0.26
CXCL12P48061 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.65■□□□□ 0.26
CXCL12P48061 KRT17P8-201ENST00000540749 863 ntBASIC16.65■□□□□ 0.26
CXCL12P48061 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.65■□□□□ 0.26
CXCL12P48061 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.65■□□□□ 0.26
CXCL12P48061 RAB43P1-201ENST00000561790 589 ntBASIC16.65■□□□□ 0.26
CXCL12P48061 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.65■□□□□ 0.26
CXCL12P48061 CHCHD2P3-201ENST00000603038 451 ntBASIC16.65■□□□□ 0.26
CXCL12P48061 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.65■□□□□ 0.26
CXCL12P48061 AL133215.2-201ENST00000609242 977 ntBASIC16.65■□□□□ 0.26
CXCL12P48061 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.65■□□□□ 0.26
CXCL12P48061 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CXCL12P48061 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL12P48061 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms