Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 PCDHB19P-201ENST00000570871 2371 ntBASIC17.13■□□□□ 0.33
HADHAP40939 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HADHAP40939 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.12■□□□□ 0.33
HADHAP40939 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HADHAP40939 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HADHAP40939 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.12■□□□□ 0.33
HADHAP40939 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HADHAP40939 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HADHAP40939 RPS2P28-201ENST00000314255 741 ntBASIC17.12■□□□□ 0.33
HADHAP40939 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HADHAP40939 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HADHAP40939 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.12■□□□□ 0.33
HADHAP40939 RNPS1P1-201ENST00000507437 918 ntBASIC17.12■□□□□ 0.33
HADHAP40939 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.12■□□□□ 0.33
HADHAP40939 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.12■□□□□ 0.33
HADHAP40939 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.12■□□□□ 0.33
HADHAP40939 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HADHAP40939 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.12■□□□□ 0.33
HADHAP40939 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HADHAP40939 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.12■□□□□ 0.33
HADHAP40939 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.12■□□□□ 0.33
HADHAP40939 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.12■□□□□ 0.33
HADHAP40939 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HADHAP40939 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HADHAP40939 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HADHAP40939 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HADHAP40939 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HADHAP40939 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HADHAP40939 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HADHAP40939 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HADHAP40939 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HADHAP40939 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.12■□□□□ 0.33
HADHAP40939 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HADHAP40939 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HADHAP40939 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.11■□□□□ 0.33
HADHAP40939 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HADHAP40939 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HADHAP40939 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.11■□□□□ 0.33
HADHAP40939 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.11■□□□□ 0.33
HADHAP40939 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.11■□□□□ 0.33
HADHAP40939 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HADHAP40939 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.11■□□□□ 0.33
HADHAP40939 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HADHAP40939 KRT18P67-201ENST00000432816 1264 ntBASIC17.11■□□□□ 0.33
HADHAP40939 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.11■□□□□ 0.33
HADHAP40939 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.11■□□□□ 0.33
HADHAP40939 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.11■□□□□ 0.33
HADHAP40939 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.11■□□□□ 0.33
HADHAP40939 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.11■□□□□ 0.33
HADHAP40939 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.11■□□□□ 0.33
HADHAP40939 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.11■□□□□ 0.33
HADHAP40939 TP73-AS1-207ENST00000624167 988 ntBASIC17.11■□□□□ 0.33
HADHAP40939 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HADHAP40939 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HADHAP40939 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HADHAP40939 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HADHAP40939 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HADHAP40939 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HADHAP40939 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HADHAP40939 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.11■□□□□ 0.33
HADHAP40939 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.11■□□□□ 0.33
HADHAP40939 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HADHAP40939 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
HADHAP40939 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.11■□□□□ 0.33
HADHAP40939 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HADHAP40939 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
HADHAP40939 TNRC18P3-201ENST00000441896 2691 ntBASIC17.11■□□□□ 0.33
HADHAP40939 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
HADHAP40939 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.11■□□□□ 0.33
HADHAP40939 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HADHAP40939 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HADHAP40939 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.1■□□□□ 0.33
HADHAP40939 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HADHAP40939 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HADHAP40939 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HADHAP40939 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HADHAP40939 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HADHAP40939 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HADHAP40939 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.1■□□□□ 0.33
HADHAP40939 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HADHAP40939 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HADHAP40939 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HADHAP40939 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HADHAP40939 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HADHAP40939 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HADHAP40939 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HADHAP40939 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.1■□□□□ 0.33
HADHAP40939 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HADHAP40939 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.1■□□□□ 0.33
HADHAP40939 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HADHAP40939 AP002414.1-201ENST00000391405 1147 ntBASIC17.1■□□□□ 0.33
HADHAP40939 RPS2P1-201ENST00000434010 821 ntBASIC17.1■□□□□ 0.33
HADHAP40939 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.1■□□□□ 0.33
HADHAP40939 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
HADHAP40939 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.1■□□□□ 0.33
HADHAP40939 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.1■□□□□ 0.33
HADHAP40939 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.1■□□□□ 0.33
HADHAP40939 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HADHAP40939 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.1■□□□□ 0.33
HADHAP40939 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms