Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
KRT9P35527 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT9P35527 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.53■□□□□ 0.56
KRT9P35527 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
KRT9P35527 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT9P35527 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT9P35527 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
KRT9P35527 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT9P35527 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT9P35527 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT9P35527 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT9P35527 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT9P35527 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.53■□□□□ 0.56
KRT9P35527 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT9P35527 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT9P35527 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT9P35527 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
KRT9P35527 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT9P35527 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT9P35527 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT9P35527 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT9P35527 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT9P35527 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT9P35527 ALOX12P2-203ENST00000570921 1945 ntBASIC18.53■□□□□ 0.56
KRT9P35527 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT9P35527 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT9P35527 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT9P35527 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
KRT9P35527 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT9P35527 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT9P35527 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT9P35527 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.52■□□□□ 0.56
KRT9P35527 PMPCAP1-201ENST00000508114 1576 ntBASIC18.52■□□□□ 0.56
KRT9P35527 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
KRT9P35527 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT9P35527 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT9P35527 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT9P35527 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
KRT9P35527 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT9P35527 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT9P35527 FOSL1P1-201ENST00000511041 816 ntBASIC18.52■□□□□ 0.56
KRT9P35527 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.52■□□□□ 0.56
KRT9P35527 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT9P35527 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.52■□□□□ 0.56
KRT9P35527 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
KRT9P35527 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.52■□□□□ 0.56
KRT9P35527 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT9P35527 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
KRT9P35527 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
KRT9P35527 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.52■□□□□ 0.56
KRT9P35527 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT9P35527 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRT9P35527 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.52■□□□□ 0.55
KRT9P35527 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
KRT9P35527 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
KRT9P35527 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRT9P35527 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT9P35527 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT9P35527 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.51■□□□□ 0.55
KRT9P35527 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT9P35527 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT9P35527 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT9P35527 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT9P35527 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT9P35527 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT9P35527 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.51■□□□□ 0.55
KRT9P35527 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT9P35527 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
KRT9P35527 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
KRT9P35527 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT9P35527 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.51■□□□□ 0.55
KRT9P35527 NUS1P1-201ENST00000446295 882 ntBASIC18.51■□□□□ 0.55
KRT9P35527 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT9P35527 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.51■□□□□ 0.55
KRT9P35527 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.51■□□□□ 0.55
KRT9P35527 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.51■□□□□ 0.55
KRT9P35527 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.51■□□□□ 0.55
KRT9P35527 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
KRT9P35527 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.51■□□□□ 0.55
KRT9P35527 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.51■□□□□ 0.55
KRT9P35527 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
KRT9P35527 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT9P35527 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.51■□□□□ 0.55
KRT9P35527 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
KRT9P35527 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT9P35527 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT9P35527 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT9P35527 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT9P35527 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT9P35527 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
KRT9P35527 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.5■□□□□ 0.55
KRT9P35527 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT9P35527 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT9P35527 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT9P35527 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT9P35527 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT9P35527 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT9P35527 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT9P35527 ABCD1P5-201ENST00000445663 754 ntBASIC18.5■□□□□ 0.55
KRT9P35527 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms