Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HTR1EP28566 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HTR1EP28566 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HTR1EP28566 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HTR1EP28566 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.23■□□□□ 0.19
HTR1EP28566 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.23■□□□□ 0.19
HTR1EP28566 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
HTR1EP28566 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HTR1EP28566 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
HTR1EP28566 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HTR1EP28566 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.23■□□□□ 0.19
HTR1EP28566 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HTR1EP28566 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HTR1EP28566 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTR1EP28566 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
HTR1EP28566 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTR1EP28566 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HTR1EP28566 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.22■□□□□ 0.19
HTR1EP28566 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTR1EP28566 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
HTR1EP28566 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTR1EP28566 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HTR1EP28566 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.22■□□□□ 0.19
HTR1EP28566 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTR1EP28566 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HTR1EP28566 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTR1EP28566 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HTR1EP28566 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HTR1EP28566 KRT18P67-201ENST00000432816 1264 ntBASIC16.22■□□□□ 0.19
HTR1EP28566 AC007967.3-201ENST00000434308 558 ntBASIC16.22■□□□□ 0.19
HTR1EP28566 RN7SL606P-201ENST00000472779 293 ntBASIC16.22■□□□□ 0.19
HTR1EP28566 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.22■□□□□ 0.19
HTR1EP28566 RNPS1P1-201ENST00000507437 918 ntBASIC16.22■□□□□ 0.19
HTR1EP28566 POLD2P1-201ENST00000511220 997 ntBASIC16.22■□□□□ 0.19
HTR1EP28566 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.22■□□□□ 0.19
HTR1EP28566 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.22■□□□□ 0.19
HTR1EP28566 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.22■□□□□ 0.19
HTR1EP28566 AC011840.4-201ENST00000578471 627 ntBASIC16.22■□□□□ 0.19
HTR1EP28566 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.22■□□□□ 0.19
HTR1EP28566 TERC-201ENST00000602385 541 ntBASIC16.22■□□□□ 0.19
HTR1EP28566 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.22■□□□□ 0.19
HTR1EP28566 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.22■□□□□ 0.19
HTR1EP28566 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HTR1EP28566 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTR1EP28566 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.22■□□□□ 0.19
HTR1EP28566 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTR1EP28566 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTR1EP28566 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
HTR1EP28566 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HTR1EP28566 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.22■□□□□ 0.19
HTR1EP28566 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HTR1EP28566 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTR1EP28566 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HTR1EP28566 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HTR1EP28566 PMS2P7-201ENST00000506558 1336 ntBASIC16.21■□□□□ 0.19
HTR1EP28566 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HTR1EP28566 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HTR1EP28566 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.21■□□□□ 0.19
HTR1EP28566 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTR1EP28566 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTR1EP28566 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HTR1EP28566 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTR1EP28566 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HTR1EP28566 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HTR1EP28566 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
HTR1EP28566 POM121L3P-201ENST00000419331 1163 ntBASIC16.21■□□□□ 0.19
HTR1EP28566 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTR1EP28566 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.21■□□□□ 0.19
HTR1EP28566 AC122714.2-201ENST00000502787 707 ntBASIC16.21■□□□□ 0.19
HTR1EP28566 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HTR1EP28566 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.21■□□□□ 0.19
HTR1EP28566 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.21■□□□□ 0.19
HTR1EP28566 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.21■□□□□ 0.19
HTR1EP28566 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.21■□□□□ 0.19
HTR1EP28566 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HTR1EP28566 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.21■□□□□ 0.19
HTR1EP28566 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTR1EP28566 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
HTR1EP28566 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.21■□□□□ 0.19
HTR1EP28566 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTR1EP28566 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTR1EP28566 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HTR1EP28566 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.21■□□□□ 0.19
HTR1EP28566 GPR89P-201ENST00000407924 1495 ntBASIC16.21■□□□□ 0.19
HTR1EP28566 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTR1EP28566 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HTR1EP28566 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HTR1EP28566 AL049757.1-201ENST00000616842 1596 ntBASIC16.21■□□□□ 0.18
HTR1EP28566 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.21■□□□□ 0.18
HTR1EP28566 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HTR1EP28566 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
HTR1EP28566 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HTR1EP28566 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HTR1EP28566 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1EP28566 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1EP28566 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
HTR1EP28566 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.2■□□□□ 0.18
HTR1EP28566 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
HTR1EP28566 AC079328.2-201ENST00000561241 3354 ntBASIC16.2■□□□□ 0.18
HTR1EP28566 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms