Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARSP26640 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
VARSP26640 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARSP26640 AC005915.1-201ENST00000624912 2018 ntBASIC16.69■□□□□ 0.26
VARSP26640 AC092053.1-201ENST00000605787 1936 ntBASIC16.69■□□□□ 0.26
VARSP26640 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VARSP26640 AL662844.4-201ENST00000606367 2838 ntBASIC16.69■□□□□ 0.26
VARSP26640 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VARSP26640 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.69■□□□□ 0.26
VARSP26640 FAM197Y8-203ENST00000450145 560 ntBASIC16.69■□□□□ 0.26
VARSP26640 SIGLEC30P-201ENST00000455569 941 ntBASIC16.69■□□□□ 0.26
VARSP26640 BX005266.1-201ENST00000473402 457 ntBASIC16.69■□□□□ 0.26
VARSP26640 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VARSP26640 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.69■□□□□ 0.26
VARSP26640 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.69■□□□□ 0.26
VARSP26640 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VARSP26640 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.69■□□□□ 0.26
VARSP26640 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARSP26640 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.69■□□□□ 0.26
VARSP26640 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.69■□□□□ 0.26
VARSP26640 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARSP26640 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
VARSP26640 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
VARSP26640 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.69■□□□□ 0.26
VARSP26640 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
VARSP26640 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
VARSP26640 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
VARSP26640 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARSP26640 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
VARSP26640 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARSP26640 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VARSP26640 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.68■□□□□ 0.26
VARSP26640 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.68■□□□□ 0.26
VARSP26640 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.68■□□□□ 0.26
VARSP26640 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 AKR1C7P-201ENST00000305623 895 ntBASIC16.68■□□□□ 0.26
VARSP26640 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.68■□□□□ 0.26
VARSP26640 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
VARSP26640 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.68■□□□□ 0.26
VARSP26640 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.68■□□□□ 0.26
VARSP26640 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.68■□□□□ 0.26
VARSP26640 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.68■□□□□ 0.26
VARSP26640 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.68■□□□□ 0.26
VARSP26640 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.68■□□□□ 0.26
VARSP26640 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.68■□□□□ 0.26
VARSP26640 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.68■□□□□ 0.26
VARSP26640 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARSP26640 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.68■□□□□ 0.26
VARSP26640 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.67■□□□□ 0.26
VARSP26640 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.67■□□□□ 0.26
VARSP26640 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARSP26640 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARSP26640 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.67■□□□□ 0.26
VARSP26640 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.67■□□□□ 0.26
VARSP26640 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.67■□□□□ 0.26
VARSP26640 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.67■□□□□ 0.26
VARSP26640 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VARSP26640 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.67■□□□□ 0.26
VARSP26640 MIR1233-2-201ENST00000408138 82 ntBASIC16.67■□□□□ 0.26
VARSP26640 MIR1233-1-201ENST00000408722 82 ntBASIC16.67■□□□□ 0.26
VARSP26640 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
VARSP26640 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.67■□□□□ 0.26
VARSP26640 AL031284.1-201ENST00000419297 478 ntBASIC16.67■□□□□ 0.26
VARSP26640 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.67■□□□□ 0.26
VARSP26640 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.67■□□□□ 0.26
VARSP26640 AF238378.1-201ENST00000526806 358 ntBASIC16.67■□□□□ 0.26
VARSP26640 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VARSP26640 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
VARSP26640 MTDHP3-201ENST00000594186 672 ntBASIC16.67■□□□□ 0.26
VARSP26640 AC073592.4-201ENST00000623827 446 ntBASIC16.67■□□□□ 0.26
VARSP26640 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARSP26640 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARSP26640 SIGLEC16-201ENST00000599858 1437 ntBASIC16.67■□□□□ 0.26
VARSP26640 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VARSP26640 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
VARSP26640 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARSP26640 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VARSP26640 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VARSP26640 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.67■□□□□ 0.26
VARSP26640 AC005052.1-201ENST00000625181 2492 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms