Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP8P22894 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.74■□□□□ 0.43
MMP8P22894 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
MMP8P22894 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MMP8P22894 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
MMP8P22894 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP8P22894 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP8P22894 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.74■□□□□ 0.43
MMP8P22894 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP8P22894 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
MMP8P22894 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
MMP8P22894 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MMP8P22894 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP8P22894 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP8P22894 KRT8P39-201ENST00000396270 1433 ntBASIC17.73■□□□□ 0.43
MMP8P22894 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.73■□□□□ 0.43
MMP8P22894 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
MMP8P22894 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.73■□□□□ 0.43
MMP8P22894 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.73■□□□□ 0.43
MMP8P22894 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MMP8P22894 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MMP8P22894 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP8P22894 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
MMP8P22894 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.73■□□□□ 0.43
MMP8P22894 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP8P22894 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.73■□□□□ 0.43
MMP8P22894 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.73■□□□□ 0.43
MMP8P22894 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.73■□□□□ 0.43
MMP8P22894 FAM185BP-201ENST00000443595 716 ntBASIC17.73■□□□□ 0.43
MMP8P22894 AC009947.1-201ENST00000444350 727 ntBASIC17.73■□□□□ 0.43
MMP8P22894 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.73■□□□□ 0.43
MMP8P22894 AC108751.1-201ENST00000490852 363 ntBASIC17.73■□□□□ 0.43
MMP8P22894 AC093909.1-201ENST00000504731 1122 ntBASIC17.73■□□□□ 0.43
MMP8P22894 UNC93B6-202ENST00000528242 690 ntBASIC17.73■□□□□ 0.43
MMP8P22894 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.73■□□□□ 0.43
MMP8P22894 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
MMP8P22894 CYP2A7P1-201ENST00000595391 815 ntBASIC17.73■□□□□ 0.43
MMP8P22894 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.73■□□□□ 0.43
MMP8P22894 ACTL9-202ENST00000612068 1252 ntBASIC17.73■□□□□ 0.43
MMP8P22894 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MMP8P22894 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
MMP8P22894 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MMP8P22894 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP8P22894 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP8P22894 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP8P22894 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
MMP8P22894 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP8P22894 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
MMP8P22894 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.72■□□□□ 0.43
MMP8P22894 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
MMP8P22894 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.72■□□□□ 0.43
MMP8P22894 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP8P22894 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP8P22894 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP8P22894 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
MMP8P22894 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP8P22894 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP8P22894 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.72■□□□□ 0.43
MMP8P22894 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.72■□□□□ 0.43
MMP8P22894 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP8P22894 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
MMP8P22894 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP8P22894 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
MMP8P22894 HCG4-201ENST00000418983 998 ntBASIC17.72■□□□□ 0.43
MMP8P22894 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP8P22894 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
MMP8P22894 AC087641.1-201ENST00000557561 1021 ntBASIC17.72■□□□□ 0.43
MMP8P22894 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP8P22894 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP8P22894 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP8P22894 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP8P22894 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP8P22894 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP8P22894 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
MMP8P22894 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.72■□□□□ 0.43
MMP8P22894 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
MMP8P22894 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.71■□□□□ 0.43
MMP8P22894 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.71■□□□□ 0.43
MMP8P22894 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
MMP8P22894 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 ALOX12P2-203ENST00000570921 1945 ntBASIC17.71■□□□□ 0.43
MMP8P22894 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
MMP8P22894 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
MMP8P22894 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
MMP8P22894 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
MMP8P22894 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.71■□□□□ 0.43
MMP8P22894 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms