Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 AC008738.7-201ENST00000609744 511 ntBASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 AC007541.1-201ENST00000570282 1469 ntBASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 CD276-201ENST00000318424 2738 ntTSL 5 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 ATP5G2P4-201ENST00000442175 420 ntBASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 AC009477.1-201ENST00000452936 217 ntBASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 AL132655.2-201ENST00000596276 594 ntBASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 AL035456.1-201ENST00000456064 1369 ntBASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CSB-PGBD3P0DP91 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CSB-PGBD3P0DP91 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
CSB-PGBD3P0DP91 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 AC009407.1-201ENST00000568958 598 ntBASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 AL589739.1-201ENST00000607720 493 ntBASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 TEX28P1-201ENST00000613479 1221 ntBASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 TEX28P2-201ENST00000617764 1221 ntBASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 MIR6752-201ENST00000618442 71 ntBASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 RAB34-223ENST00000636154 730 ntTSL 2 BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 CETN4P-206ENST00000642099 2168 ntBASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 FOXO1B-201ENST00000504678 1527 ntBASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CSB-PGBD3P0DP91 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 OR6D1P-202ENST00000641007 5290 ntBASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 SLC25A1P3-201ENST00000395415 828 ntBASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 TP53TG3HP-202ENST00000569755 579 ntBASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 MIR4492-201ENST00000581627 80 ntBASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CSB-PGBD3P0DP91 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms