Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
THBS1P07996 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.56■□□□□ 0.08
THBS1P07996 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.56■□□□□ 0.08
THBS1P07996 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
THBS1P07996 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.56■□□□□ 0.08
THBS1P07996 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.56■□□□□ 0.08
THBS1P07996 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.56■□□□□ 0.08
THBS1P07996 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.56■□□□□ 0.08
THBS1P07996 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
THBS1P07996 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
THBS1P07996 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
THBS1P07996 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
THBS1P07996 UBALD1-205ENST00000590891 2641 ntBASIC15.55■□□□□ 0.08
THBS1P07996 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
THBS1P07996 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
THBS1P07996 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.55■□□□□ 0.08
THBS1P07996 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.55■□□□□ 0.08
THBS1P07996 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
THBS1P07996 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
THBS1P07996 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
THBS1P07996 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
THBS1P07996 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.55■□□□□ 0.08
THBS1P07996 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
THBS1P07996 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.55■□□□□ 0.08
THBS1P07996 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
THBS1P07996 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
THBS1P07996 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.55■□□□□ 0.08
THBS1P07996 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
THBS1P07996 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
THBS1P07996 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
THBS1P07996 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.55■□□□□ 0.08
THBS1P07996 ELK2BP-201ENST00000415014 1224 ntBASIC15.55■□□□□ 0.08
THBS1P07996 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
THBS1P07996 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.55■□□□□ 0.08
THBS1P07996 AF238378.1-201ENST00000526806 358 ntBASIC15.55■□□□□ 0.08
THBS1P07996 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.55■□□□□ 0.08
THBS1P07996 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.55■□□□□ 0.08
THBS1P07996 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.55■□□□□ 0.08
THBS1P07996 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
THBS1P07996 AC107918.4-202ENST00000641623 219 ntBASIC15.55■□□□□ 0.08
THBS1P07996 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
THBS1P07996 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.55■□□□□ 0.08
THBS1P07996 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
THBS1P07996 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
THBS1P07996 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.55■□□□□ 0.08
THBS1P07996 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
THBS1P07996 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
THBS1P07996 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
THBS1P07996 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
THBS1P07996 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
THBS1P07996 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
THBS1P07996 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
THBS1P07996 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.55■□□□□ 0.08
THBS1P07996 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
THBS1P07996 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
THBS1P07996 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.54■□□□□ 0.08
THBS1P07996 PI4KAP1-204ENST00000612579 1703 ntBASIC15.54■□□□□ 0.08
THBS1P07996 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.54■□□□□ 0.08
THBS1P07996 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
THBS1P07996 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
THBS1P07996 AC002310.6-201ENST00000624451 1377 ntBASIC15.54■□□□□ 0.08
THBS1P07996 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.54■□□□□ 0.08
THBS1P07996 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
THBS1P07996 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
THBS1P07996 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.54■□□□□ 0.08
THBS1P07996 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
THBS1P07996 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
THBS1P07996 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.54■□□□□ 0.08
THBS1P07996 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.54■□□□□ 0.08
THBS1P07996 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.54■□□□□ 0.08
THBS1P07996 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
THBS1P07996 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.54■□□□□ 0.08
THBS1P07996 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.54■□□□□ 0.08
THBS1P07996 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.54■□□□□ 0.08
THBS1P07996 AC091167.2-201ENST00000579581 588 ntBASIC15.54■□□□□ 0.08
THBS1P07996 MPDU1-223ENST00000582151 728 ntBASIC15.54■□□□□ 0.08
THBS1P07996 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.54■□□□□ 0.08
THBS1P07996 AL121912.1-201ENST00000603683 238 ntBASIC15.54■□□□□ 0.08
THBS1P07996 REXO1L3P-201ENST00000622202 1288 ntBASIC15.54■□□□□ 0.08
THBS1P07996 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
THBS1P07996 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
THBS1P07996 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
THBS1P07996 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.54■□□□□ 0.08
THBS1P07996 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
THBS1P07996 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
THBS1P07996 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
THBS1P07996 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms