Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.97■□□□□ 0.31
APOA4P06727 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.97■□□□□ 0.31
APOA4P06727 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 LINC00982-205ENST00000420957 435 ntBASIC16.97■□□□□ 0.31
APOA4P06727 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.97■□□□□ 0.31
APOA4P06727 FAAHP1-202ENST00000446499 1238 ntBASIC16.97■□□□□ 0.31
APOA4P06727 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.97■□□□□ 0.31
APOA4P06727 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.97■□□□□ 0.31
APOA4P06727 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.97■□□□□ 0.31
APOA4P06727 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.97■□□□□ 0.31
APOA4P06727 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
APOA4P06727 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
APOA4P06727 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.97■□□□□ 0.31
APOA4P06727 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.97■□□□□ 0.31
APOA4P06727 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
APOA4P06727 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.97■□□□□ 0.31
APOA4P06727 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.97■□□□□ 0.31
APOA4P06727 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 AC006449.5-201ENST00000610658 2098 ntBASIC16.97■□□□□ 0.31
APOA4P06727 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOA4P06727 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
APOA4P06727 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
APOA4P06727 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOA4P06727 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
APOA4P06727 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
APOA4P06727 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
APOA4P06727 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
APOA4P06727 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
APOA4P06727 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
APOA4P06727 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
APOA4P06727 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.96■□□□□ 0.31
APOA4P06727 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOA4P06727 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
APOA4P06727 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.96■□□□□ 0.31
APOA4P06727 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.96■□□□□ 0.31
APOA4P06727 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.96■□□□□ 0.31
APOA4P06727 AC073648.2-201ENST00000510116 352 ntBASIC16.96■□□□□ 0.31
APOA4P06727 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.96■□□□□ 0.31
APOA4P06727 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.96■□□□□ 0.31
APOA4P06727 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
APOA4P06727 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.96■□□□□ 0.31
APOA4P06727 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
APOA4P06727 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.96■□□□□ 0.31
APOA4P06727 AL121912.1-201ENST00000603683 238 ntBASIC16.96■□□□□ 0.31
APOA4P06727 AL589182.2-201ENST00000619332 1049 ntBASIC16.96■□□□□ 0.31
APOA4P06727 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
APOA4P06727 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.96■□□□□ 0.31
APOA4P06727 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOA4P06727 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
APOA4P06727 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOA4P06727 FER1L4-210ENST00000615531 5998 ntBASIC16.96■□□□□ 0.31
APOA4P06727 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
APOA4P06727 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
APOA4P06727 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
APOA4P06727 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
APOA4P06727 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.96■□□□□ 0.3
APOA4P06727 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
APOA4P06727 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
APOA4P06727 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
APOA4P06727 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.96■□□□□ 0.3
APOA4P06727 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
APOA4P06727 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
APOA4P06727 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOA4P06727 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOA4P06727 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
APOA4P06727 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOA4P06727 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
APOA4P06727 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOA4P06727 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOA4P06727 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
APOA4P06727 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.95■□□□□ 0.3
APOA4P06727 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOA4P06727 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOA4P06727 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.95■□□□□ 0.3
APOA4P06727 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOA4P06727 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOA4P06727 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.95■□□□□ 0.3
APOA4P06727 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
APOA4P06727 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
APOA4P06727 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOA4P06727 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.95■□□□□ 0.3
APOA4P06727 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.95■□□□□ 0.3
APOA4P06727 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.95■□□□□ 0.3
APOA4P06727 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
APOA4P06727 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.95■□□□□ 0.3
APOA4P06727 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms