Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFBP01127 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PDGFBP01127 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFBP01127 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFBP01127 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.79■□□□□ 0.28
PDGFBP01127 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFBP01127 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PDGFBP01127 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.79■□□□□ 0.28
PDGFBP01127 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFBP01127 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFBP01127 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PDGFBP01127 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.79■□□□□ 0.28
PDGFBP01127 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.79■□□□□ 0.28
PDGFBP01127 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.79■□□□□ 0.28
PDGFBP01127 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.79■□□□□ 0.28
PDGFBP01127 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFBP01127 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PDGFBP01127 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
PDGFBP01127 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.79■□□□□ 0.28
PDGFBP01127 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFBP01127 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.79■□□□□ 0.28
PDGFBP01127 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.79■□□□□ 0.28
PDGFBP01127 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFBP01127 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.79■□□□□ 0.28
PDGFBP01127 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFBP01127 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFBP01127 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFBP01127 AC073439.1-201ENST00000624121 1774 ntBASIC16.79■□□□□ 0.28
PDGFBP01127 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFBP01127 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.79■□□□□ 0.28
PDGFBP01127 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PDGFBP01127 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFBP01127 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PDGFBP01127 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PDGFBP01127 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFBP01127 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFBP01127 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFBP01127 AC093525.8-201ENST00000624099 1342 ntBASIC16.78■□□□□ 0.28
PDGFBP01127 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFBP01127 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFBP01127 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFBP01127 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFBP01127 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFBP01127 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFBP01127 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PDGFBP01127 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.78■□□□□ 0.28
PDGFBP01127 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.78■□□□□ 0.28
PDGFBP01127 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFBP01127 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.78■□□□□ 0.28
PDGFBP01127 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PDGFBP01127 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.78■□□□□ 0.28
PDGFBP01127 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.78■□□□□ 0.28
PDGFBP01127 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.78■□□□□ 0.28
PDGFBP01127 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.78■□□□□ 0.28
PDGFBP01127 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.78■□□□□ 0.28
PDGFBP01127 LINC01451-201ENST00000623792 534 ntBASIC16.78■□□□□ 0.28
PDGFBP01127 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.78■□□□□ 0.28
PDGFBP01127 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFBP01127 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFBP01127 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PDGFBP01127 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.78■□□□□ 0.28
PDGFBP01127 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
PDGFBP01127 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.78■□□□□ 0.28
PDGFBP01127 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFBP01127 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFBP01127 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PDGFBP01127 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PDGFBP01127 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.78■□□□□ 0.28
PDGFBP01127 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PDGFBP01127 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFBP01127 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PDGFBP01127 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.77■□□□□ 0.28
PDGFBP01127 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFBP01127 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PDGFBP01127 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.77■□□□□ 0.28
PDGFBP01127 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFBP01127 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFBP01127 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
PDGFBP01127 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.77■□□□□ 0.28
PDGFBP01127 BRWD1P1-201ENST00000401091 371 ntBASIC16.77■□□□□ 0.28
PDGFBP01127 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.77■□□□□ 0.28
PDGFBP01127 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PDGFBP01127 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.77■□□□□ 0.28
PDGFBP01127 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.77■□□□□ 0.28
PDGFBP01127 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PDGFBP01127 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.77■□□□□ 0.28
PDGFBP01127 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.77■□□□□ 0.28
PDGFBP01127 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.77■□□□□ 0.28
PDGFBP01127 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.77■□□□□ 0.28
PDGFBP01127 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFBP01127 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PDGFBP01127 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFBP01127 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDGFBP01127 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDGFBP01127 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDGFBP01127 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PDGFBP01127 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFBP01127 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFBP01127 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDGFBP01127 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms