Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC002347.1-201ENST00000569543 541 ntBASIC17.32■□□□□ 0.36
MT-CO1P00395 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.32■□□□□ 0.36
MT-CO1P00395 REXO1L3P-201ENST00000622202 1288 ntBASIC17.32■□□□□ 0.36
MT-CO1P00395 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.32■□□□□ 0.36
MT-CO1P00395 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-CO1P00395 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MT-CO1P00395 LINC02012-201ENST00000608206 1725 ntBASIC17.32■□□□□ 0.36
MT-CO1P00395 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-CO1P00395 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
MT-CO1P00395 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-CO1P00395 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MT-CO1P00395 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.31■□□□□ 0.36
MT-CO1P00395 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-CO1P00395 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MT-CO1P00395 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MT-CO1P00395 AC025580.3-201ENST00000617932 1424 ntBASIC17.31■□□□□ 0.36
MT-CO1P00395 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-CO1P00395 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.31■□□□□ 0.36
MT-CO1P00395 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.31■□□□□ 0.36
MT-CO1P00395 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.31■□□□□ 0.36
MT-CO1P00395 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.31■□□□□ 0.36
MT-CO1P00395 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.31■□□□□ 0.36
MT-CO1P00395 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.31■□□□□ 0.36
MT-CO1P00395 KRT19P2-202ENST00000557173 1012 ntBASIC17.31■□□□□ 0.36
MT-CO1P00395 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.31■□□□□ 0.36
MT-CO1P00395 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.31■□□□□ 0.36
MT-CO1P00395 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-CO1P00395 AC010327.4-202ENST00000591484 748 ntBASIC17.31■□□□□ 0.36
MT-CO1P00395 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.31■□□□□ 0.36
MT-CO1P00395 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.31■□□□□ 0.36
MT-CO1P00395 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.31■□□□□ 0.36
MT-CO1P00395 AC006538.3-201ENST00000612495 578 ntBASIC17.31■□□□□ 0.36
MT-CO1P00395 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MT-CO1P00395 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
MT-CO1P00395 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-CO1P00395 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.31■□□□□ 0.36
MT-CO1P00395 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-CO1P00395 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-CO1P00395 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MT-CO1P00395 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-CO1P00395 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
MT-CO1P00395 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
MT-CO1P00395 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
MT-CO1P00395 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.3■□□□□ 0.36
MT-CO1P00395 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.3■□□□□ 0.36
MT-CO1P00395 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
MT-CO1P00395 AC129492.6-201ENST00000611383 1305 ntBASIC17.3■□□□□ 0.36
MT-CO1P00395 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.3■□□□□ 0.36
MT-CO1P00395 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.3■□□□□ 0.36
MT-CO1P00395 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 AC112482.1-201ENST00000492080 688 ntBASIC17.3■□□□□ 0.36
MT-CO1P00395 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.3■□□□□ 0.36
MT-CO1P00395 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.3■□□□□ 0.36
MT-CO1P00395 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.3■□□□□ 0.36
MT-CO1P00395 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
MT-CO1P00395 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.3■□□□□ 0.36
MT-CO1P00395 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
MT-CO1P00395 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.3■□□□□ 0.36
MT-CO1P00395 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
MT-CO1P00395 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.3■□□□□ 0.36
MT-CO1P00395 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
MT-CO1P00395 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.3■□□□□ 0.36
MT-CO1P00395 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.3■□□□□ 0.36
MT-CO1P00395 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.3■□□□□ 0.36
MT-CO1P00395 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.3■□□□□ 0.36
MT-CO1P00395 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-CO1P00395 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.29■□□□□ 0.36
MT-CO1P00395 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-CO1P00395 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
MT-CO1P00395 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.29■□□□□ 0.36
MT-CO1P00395 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.29■□□□□ 0.36
MT-CO1P00395 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms