Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE6O95741 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.62■□□□□ 0.25
CPNE6O95741 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.62■□□□□ 0.25
CPNE6O95741 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE6O95741 KRT19P2-202ENST00000557173 1012 ntBASIC16.62■□□□□ 0.25
CPNE6O95741 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CPNE6O95741 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.62■□□□□ 0.25
CPNE6O95741 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE6O95741 AL078644.1-201ENST00000609881 752 ntBASIC16.62■□□□□ 0.25
CPNE6O95741 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE6O95741 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE6O95741 ELL2P1-201ENST00000413990 1906 ntBASIC16.62■□□□□ 0.25
CPNE6O95741 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CPNE6O95741 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE6O95741 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CPNE6O95741 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CPNE6O95741 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 CROCCP2-202ENST00000412962 2773 ntBASIC16.61■□□□□ 0.25
CPNE6O95741 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.61■□□□□ 0.25
CPNE6O95741 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CPNE6O95741 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.61■□□□□ 0.25
CPNE6O95741 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CPNE6O95741 REXO1L11P-201ENST00000620964 1927 ntBASIC16.61■□□□□ 0.25
CPNE6O95741 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CPNE6O95741 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.61■□□□□ 0.25
CPNE6O95741 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.61■□□□□ 0.25
CPNE6O95741 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.61■□□□□ 0.25
CPNE6O95741 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.61■□□□□ 0.25
CPNE6O95741 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.61■□□□□ 0.25
CPNE6O95741 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CPNE6O95741 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.61■□□□□ 0.25
CPNE6O95741 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.61■□□□□ 0.25
CPNE6O95741 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE6O95741 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.61■□□□□ 0.25
CPNE6O95741 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.61■□□□□ 0.25
CPNE6O95741 AC023141.13-201ENST00000604991 943 ntBASIC16.61■□□□□ 0.25
CPNE6O95741 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 AL135999.2-201ENST00000622438 1686 ntBASIC16.61■□□□□ 0.25
CPNE6O95741 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CPNE6O95741 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE6O95741 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE6O95741 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE6O95741 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE6O95741 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE6O95741 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.6■□□□□ 0.25
CPNE6O95741 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.6■□□□□ 0.25
CPNE6O95741 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.6■□□□□ 0.25
CPNE6O95741 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE6O95741 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE6O95741 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE6O95741 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE6O95741 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE6O95741 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CPNE6O95741 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE6O95741 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CPNE6O95741 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE6O95741 CEND1P1-201ENST00000451006 455 ntBASIC16.6■□□□□ 0.25
CPNE6O95741 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE6O95741 CXCL1P1-201ENST00000502804 216 ntBASIC16.6■□□□□ 0.25
CPNE6O95741 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
CPNE6O95741 AC027796.2-201ENST00000575326 344 ntBASIC16.6■□□□□ 0.25
CPNE6O95741 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.6■□□□□ 0.25
CPNE6O95741 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CPNE6O95741 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.6■□□□□ 0.25
CPNE6O95741 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CPNE6O95741 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE6O95741 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE6O95741 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE6O95741 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE6O95741 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE6O95741 AC025580.3-201ENST00000617932 1424 ntBASIC16.6■□□□□ 0.25
CPNE6O95741 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE6O95741 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms