Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTN3O95197 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTN3O95197 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.81■□□□□ 0.44
RTN3O95197 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN3O95197 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTN3O95197 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.81■□□□□ 0.44
RTN3O95197 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.81■□□□□ 0.44
RTN3O95197 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.81■□□□□ 0.44
RTN3O95197 MIR4515-201ENST00000584082 81 ntBASIC17.81■□□□□ 0.44
RTN3O95197 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.81■□□□□ 0.44
RTN3O95197 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.81■□□□□ 0.44
RTN3O95197 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.81■□□□□ 0.44
RTN3O95197 AC055717.3-201ENST00000622967 595 ntBASIC17.81■□□□□ 0.44
RTN3O95197 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN3O95197 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RTN3O95197 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTN3O95197 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RTN3O95197 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.81■□□□□ 0.44
RTN3O95197 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
RTN3O95197 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN3O95197 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.81■□□□□ 0.44
RTN3O95197 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN3O95197 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN3O95197 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTN3O95197 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.81■□□□□ 0.44
RTN3O95197 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN3O95197 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RTN3O95197 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RTN3O95197 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
RTN3O95197 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.8■□□□□ 0.44
RTN3O95197 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.8■□□□□ 0.44
RTN3O95197 HTR5BP-201ENST00000430851 1154 ntBASIC17.8■□□□□ 0.44
RTN3O95197 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.8■□□□□ 0.44
RTN3O95197 YBX1P5-201ENST00000509441 847 ntBASIC17.8■□□□□ 0.44
RTN3O95197 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.8■□□□□ 0.44
RTN3O95197 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.8■□□□□ 0.44
RTN3O95197 AC124947.2-201ENST00000547118 1133 ntBASIC17.8■□□□□ 0.44
RTN3O95197 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.8■□□□□ 0.44
RTN3O95197 AL031432.2-201ENST00000566714 459 ntBASIC17.8■□□□□ 0.44
RTN3O95197 AL928711.1-201ENST00000570165 459 ntBASIC17.8■□□□□ 0.44
RTN3O95197 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.8■□□□□ 0.44
RTN3O95197 AL691403.2-201ENST00000618460 490 ntBASIC17.8■□□□□ 0.44
RTN3O95197 AC079781.4-201ENST00000641908 219 ntBASIC17.8■□□□□ 0.44
RTN3O95197 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RTN3O95197 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RTN3O95197 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 AL353732.1-201ENST00000569618 1459 ntBASIC17.8■□□□□ 0.44
RTN3O95197 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTN3O95197 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RTN3O95197 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RTN3O95197 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RTN3O95197 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.79■□□□□ 0.44
RTN3O95197 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
RTN3O95197 AC004967.1-201ENST00000453589 447 ntBASIC17.79■□□□□ 0.44
RTN3O95197 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 ALG1L5P-201ENST00000482043 771 ntBASIC17.79■□□□□ 0.44
RTN3O95197 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.79■□□□□ 0.44
RTN3O95197 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.79■□□□□ 0.44
RTN3O95197 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.79■□□□□ 0.44
RTN3O95197 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.79■□□□□ 0.44
RTN3O95197 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 AL078644.1-201ENST00000609881 752 ntBASIC17.79■□□□□ 0.44
RTN3O95197 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.79■□□□□ 0.44
RTN3O95197 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.79■□□□□ 0.44
RTN3O95197 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.79■□□□□ 0.44
RTN3O95197 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RTN3O95197 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN3O95197 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms