Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.99■□□□□ 0.31
GPC4O75487 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.99■□□□□ 0.31
GPC4O75487 AC093525.9-201ENST00000624961 1746 ntBASIC16.99■□□□□ 0.31
GPC4O75487 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
GPC4O75487 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
GPC4O75487 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
GPC4O75487 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
GPC4O75487 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
GPC4O75487 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
GPC4O75487 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.99■□□□□ 0.31
GPC4O75487 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.99■□□□□ 0.31
GPC4O75487 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.99■□□□□ 0.31
GPC4O75487 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
GPC4O75487 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
GPC4O75487 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.99■□□□□ 0.31
GPC4O75487 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
GPC4O75487 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.98■□□□□ 0.31
GPC4O75487 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GPC4O75487 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.98■□□□□ 0.31
GPC4O75487 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.98■□□□□ 0.31
GPC4O75487 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
GPC4O75487 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC4O75487 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC4O75487 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.98■□□□□ 0.31
GPC4O75487 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC4O75487 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC4O75487 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC4O75487 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.98■□□□□ 0.31
GPC4O75487 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC4O75487 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GPC4O75487 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.98■□□□□ 0.31
GPC4O75487 SCARNA2-201ENST00000458748 420 ntBASIC16.98■□□□□ 0.31
GPC4O75487 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC4O75487 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.98■□□□□ 0.31
GPC4O75487 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.98■□□□□ 0.31
GPC4O75487 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
GPC4O75487 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.98■□□□□ 0.31
GPC4O75487 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.98■□□□□ 0.31
GPC4O75487 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
GPC4O75487 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC4O75487 AL121912.1-201ENST00000603683 238 ntBASIC16.98■□□□□ 0.31
GPC4O75487 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
GPC4O75487 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC4O75487 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC4O75487 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC4O75487 AC097637.2-201ENST00000624096 1997 ntBASIC16.98■□□□□ 0.31
GPC4O75487 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.98■□□□□ 0.31
GPC4O75487 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC4O75487 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC4O75487 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GPC4O75487 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.98■□□□□ 0.31
GPC4O75487 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.98■□□□□ 0.31
GPC4O75487 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.98■□□□□ 0.31
GPC4O75487 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
GPC4O75487 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
GPC4O75487 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.97■□□□□ 0.31
GPC4O75487 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.97■□□□□ 0.31
GPC4O75487 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.97■□□□□ 0.31
GPC4O75487 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.97■□□□□ 0.31
GPC4O75487 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.97■□□□□ 0.31
GPC4O75487 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GPC4O75487 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.97■□□□□ 0.31
GPC4O75487 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
GPC4O75487 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.97■□□□□ 0.31
GPC4O75487 AC005915.1-201ENST00000624912 2018 ntBASIC16.97■□□□□ 0.31
GPC4O75487 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC4O75487 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms