Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF40O75150 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RNF40O75150 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF40O75150 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF40O75150 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF40O75150 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF40O75150 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF40O75150 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF40O75150 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
RNF40O75150 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF40O75150 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF40O75150 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF40O75150 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF40O75150 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF40O75150 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF40O75150 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF40O75150 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RNF40O75150 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF40O75150 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF40O75150 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RNF40O75150 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RNF40O75150 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
RNF40O75150 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF40O75150 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF40O75150 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.3■□□□□ 0.52
RNF40O75150 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF40O75150 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF40O75150 RPS2P1-201ENST00000434010 821 ntBASIC18.3■□□□□ 0.52
RNF40O75150 ABCD1P5-201ENST00000445663 754 ntBASIC18.3■□□□□ 0.52
RNF40O75150 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF40O75150 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.3■□□□□ 0.52
RNF40O75150 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF40O75150 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF40O75150 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF40O75150 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
RNF40O75150 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RNF40O75150 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF40O75150 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF40O75150 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RNF40O75150 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF40O75150 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF40O75150 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF40O75150 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF40O75150 AC104109.2-201ENST00000602919 1418 ntBASIC18.3■□□□□ 0.52
RNF40O75150 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF40O75150 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF40O75150 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
RNF40O75150 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF40O75150 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF40O75150 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF40O75150 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF40O75150 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF40O75150 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF40O75150 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF40O75150 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF40O75150 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF40O75150 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF40O75150 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF40O75150 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF40O75150 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF40O75150 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF40O75150 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF40O75150 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF40O75150 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF40O75150 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF40O75150 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF40O75150 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF40O75150 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RNF40O75150 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RNF40O75150 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RNF40O75150 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF40O75150 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF40O75150 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF40O75150 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF40O75150 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
RNF40O75150 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF40O75150 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
RNF40O75150 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF40O75150 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF40O75150 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF40O75150 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
RNF40O75150 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RNF40O75150 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF40O75150 IGHV3-22-201ENST00000520721 359 ntBASIC18.28■□□□□ 0.52
RNF40O75150 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF40O75150 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.28■□□□□ 0.52
RNF40O75150 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.28■□□□□ 0.52
RNF40O75150 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms