Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CUBNO60494 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.35□□□□□ -0.27
CUBNO60494 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CUBNO60494 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CUBNO60494 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CUBNO60494 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CUBNO60494 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CUBNO60494 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.35□□□□□ -0.27
CUBNO60494 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CUBNO60494 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CUBNO60494 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CUBNO60494 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.35□□□□□ -0.27
CUBNO60494 USP32P1-208ENST00000506594 1164 ntBASIC13.35□□□□□ -0.27
CUBNO60494 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.35□□□□□ -0.27
CUBNO60494 AC073389.1-201ENST00000595595 795 ntBASIC13.35□□□□□ -0.27
CUBNO60494 AL133215.2-201ENST00000609242 977 ntBASIC13.35□□□□□ -0.27
CUBNO60494 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CUBNO60494 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CUBNO60494 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.35□□□□□ -0.27
CUBNO60494 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CUBNO60494 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CUBNO60494 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CUBNO60494 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CUBNO60494 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.35□□□□□ -0.27
CUBNO60494 AC131009.4-201ENST00000624048 1740 ntBASIC13.35□□□□□ -0.27
CUBNO60494 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CUBNO60494 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.35□□□□□ -0.27
CUBNO60494 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CUBNO60494 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CUBNO60494 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CUBNO60494 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CUBNO60494 AC020907.1-201ENST00000616460 1350 ntBASIC13.35□□□□□ -0.27
CUBNO60494 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CUBNO60494 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CUBNO60494 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.34□□□□□ -0.27
CUBNO60494 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.34□□□□□ -0.27
CUBNO60494 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.34□□□□□ -0.27
CUBNO60494 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CUBNO60494 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CUBNO60494 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.34□□□□□ -0.27
CUBNO60494 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
CUBNO60494 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.34□□□□□ -0.27
CUBNO60494 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 RNU1-129P-201ENST00000384064 167 ntBASIC13.34□□□□□ -0.27
CUBNO60494 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CUBNO60494 KRT223P-202ENST00000449164 1292 ntBASIC13.34□□□□□ -0.27
CUBNO60494 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.34□□□□□ -0.27
CUBNO60494 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.34□□□□□ -0.27
CUBNO60494 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.34□□□□□ -0.27
CUBNO60494 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.34□□□□□ -0.27
CUBNO60494 U1.21-201ENST00000580816 167 ntBASIC13.34□□□□□ -0.27
CUBNO60494 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.34□□□□□ -0.27
CUBNO60494 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.34□□□□□ -0.27
CUBNO60494 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.34□□□□□ -0.27
CUBNO60494 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
CUBNO60494 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
CUBNO60494 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CUBNO60494 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.34□□□□□ -0.27
CUBNO60494 AC010319.3-201ENST00000597028 470 ntBASIC13.34□□□□□ -0.27
CUBNO60494 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CUBNO60494 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CUBNO60494 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.34□□□□□ -0.27
CUBNO60494 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
CUBNO60494 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CUBNO60494 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CUBNO60494 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CUBNO60494 HAUS4P1-201ENST00000406739 1145 ntBASIC13.33□□□□□ -0.27
CUBNO60494 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CUBNO60494 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.33□□□□□ -0.27
CUBNO60494 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.33□□□□□ -0.27
CUBNO60494 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CUBNO60494 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CUBNO60494 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.33□□□□□ -0.28
CUBNO60494 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CUBNO60494 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CUBNO60494 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.33□□□□□ -0.28
CUBNO60494 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CUBNO60494 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CUBNO60494 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
CUBNO60494 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms