Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SMARCA5O60264 IGLL3P-201ENST00000412472 434 ntBASIC20.83■□□□□ 0.93
SMARCA5O60264 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.83■□□□□ 0.93
SMARCA5O60264 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.83■□□□□ 0.93
SMARCA5O60264 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.83■□□□□ 0.93
SMARCA5O60264 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.83■□□□□ 0.93
SMARCA5O60264 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.83■□□□□ 0.93
SMARCA5O60264 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
SMARCA5O60264 AC104109.2-201ENST00000602919 1418 ntBASIC20.83■□□□□ 0.93
SMARCA5O60264 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMARCA5O60264 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMARCA5O60264 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SMARCA5O60264 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.83■□□□□ 0.92
SMARCA5O60264 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMARCA5O60264 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.83■□□□□ 0.92
SMARCA5O60264 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.83■□□□□ 0.92
SMARCA5O60264 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
SMARCA5O60264 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SMARCA5O60264 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SMARCA5O60264 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCA5O60264 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SMARCA5O60264 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCA5O60264 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SMARCA5O60264 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.82■□□□□ 0.92
SMARCA5O60264 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SMARCA5O60264 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
SMARCA5O60264 AL118508.1-201ENST00000613502 2345 ntBASIC20.82■□□□□ 0.92
SMARCA5O60264 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCA5O60264 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.82■□□□□ 0.92
SMARCA5O60264 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCA5O60264 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
SMARCA5O60264 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.82■□□□□ 0.92
SMARCA5O60264 AC034105.1-201ENST00000563488 319 ntBASIC20.82■□□□□ 0.92
SMARCA5O60264 ACTL9-202ENST00000612068 1252 ntBASIC20.82■□□□□ 0.92
SMARCA5O60264 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.82■□□□□ 0.92
SMARCA5O60264 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SMARCA5O60264 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCA5O60264 TNRC18P3-201ENST00000441896 2691 ntBASIC20.82■□□□□ 0.92
SMARCA5O60264 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 ALOX12P2-203ENST00000570921 1945 ntBASIC20.82■□□□□ 0.92
SMARCA5O60264 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCA5O60264 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.81■□□□□ 0.92
SMARCA5O60264 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.81■□□□□ 0.92
SMARCA5O60264 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
SMARCA5O60264 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCA5O60264 PCDHB19P-201ENST00000570871 2371 ntBASIC20.81■□□□□ 0.92
SMARCA5O60264 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCA5O60264 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCA5O60264 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.81■□□□□ 0.92
SMARCA5O60264 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.81■□□□□ 0.92
SMARCA5O60264 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCA5O60264 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCA5O60264 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCA5O60264 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCA5O60264 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCA5O60264 AL590627.1-203ENST00000421194 1026 ntBASIC20.81■□□□□ 0.92
SMARCA5O60264 RPL13AP23-201ENST00000480739 586 ntBASIC20.81■□□□□ 0.92
SMARCA5O60264 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.81■□□□□ 0.92
SMARCA5O60264 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCA5O60264 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SMARCA5O60264 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.81■□□□□ 0.92
SMARCA5O60264 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCA5O60264 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCA5O60264 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCA5O60264 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SMARCA5O60264 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCA5O60264 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SMARCA5O60264 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCA5O60264 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCA5O60264 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.8■□□□□ 0.92
SMARCA5O60264 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.8■□□□□ 0.92
SMARCA5O60264 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCA5O60264 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.8■□□□□ 0.92
SMARCA5O60264 AC005052.1-201ENST00000625181 2492 ntBASIC20.8■□□□□ 0.92
SMARCA5O60264 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCA5O60264 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.8■□□□□ 0.92
SMARCA5O60264 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCA5O60264 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.8■□□□□ 0.92
SMARCA5O60264 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCA5O60264 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.8■□□□□ 0.92
SMARCA5O60264 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.8■□□□□ 0.92
SMARCA5O60264 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.8■□□□□ 0.92
SMARCA5O60264 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.8■□□□□ 0.92
SMARCA5O60264 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCA5O60264 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms