Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH7O60245 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH7O60245 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
PCDH7O60245 LINC00895-201ENST00000629028 1637 ntBASIC16.16■□□□□ 0.18
PCDH7O60245 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDH7O60245 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDH7O60245 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
PCDH7O60245 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDH7O60245 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDH7O60245 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDH7O60245 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDH7O60245 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDH7O60245 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDH7O60245 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDH7O60245 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDH7O60245 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.15■□□□□ 0.18
PCDH7O60245 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDH7O60245 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDH7O60245 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDH7O60245 AC021087.4-201ENST00000563761 564 ntBASIC16.15■□□□□ 0.18
PCDH7O60245 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDH7O60245 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDH7O60245 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDH7O60245 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.15■□□□□ 0.18
PCDH7O60245 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PCDH7O60245 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDH7O60245 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDH7O60245 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDH7O60245 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDH7O60245 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDH7O60245 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH7O60245 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
PCDH7O60245 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
PCDH7O60245 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PCDH7O60245 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PCDH7O60245 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
PCDH7O60245 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDH7O60245 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PCDH7O60245 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDH7O60245 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
PCDH7O60245 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDH7O60245 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH7O60245 ELK2BP-201ENST00000415014 1224 ntBASIC16.14■□□□□ 0.17
PCDH7O60245 LAGE3P1-201ENST00000425356 484 ntBASIC16.14■□□□□ 0.17
PCDH7O60245 PAWRP1-201ENST00000451083 565 ntBASIC16.14■□□□□ 0.17
PCDH7O60245 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH7O60245 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH7O60245 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH7O60245 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDH7O60245 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDH7O60245 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH7O60245 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH7O60245 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDH7O60245 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH7O60245 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH7O60245 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH7O60245 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms