Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PCDH17O14917 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
PCDH17O14917 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDH17O14917 CRYGEP-201ENST00000412192 528 ntBASIC16.17■□□□□ 0.18
PCDH17O14917 AC092183.1-201ENST00000469884 875 ntBASIC16.17■□□□□ 0.18
PCDH17O14917 PGAM5P1-201ENST00000518923 814 ntBASIC16.17■□□□□ 0.18
PCDH17O14917 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PCDH17O14917 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
PCDH17O14917 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDH17O14917 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.17■□□□□ 0.18
PCDH17O14917 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDH17O14917 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDH17O14917 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDH17O14917 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDH17O14917 AC010654.1-201ENST00000615722 808 ntBASIC16.17■□□□□ 0.18
PCDH17O14917 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDH17O14917 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDH17O14917 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 AC005915.1-201ENST00000624912 2018 ntBASIC16.17■□□□□ 0.18
PCDH17O14917 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH17O14917 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDH17O14917 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDH17O14917 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH17O14917 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH17O14917 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PCDH17O14917 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH17O14917 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PCDH17O14917 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDH17O14917 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH17O14917 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDH17O14917 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PCDH17O14917 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDH17O14917 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDH17O14917 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDH17O14917 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDH17O14917 MRPL20P1-201ENST00000400819 433 ntBASIC16.16■□□□□ 0.18
PCDH17O14917 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PCDH17O14917 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH17O14917 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDH17O14917 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
PCDH17O14917 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
PCDH17O14917 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH17O14917 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH17O14917 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PCDH17O14917 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH17O14917 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH17O14917 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH17O14917 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH17O14917 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH17O14917 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH17O14917 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH17O14917 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH17O14917 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH17O14917 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH17O14917 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PCDH17O14917 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDH17O14917 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDH17O14917 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDH17O14917 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDH17O14917 DNAJB3-201ENST00000446806 729 ntBASIC16.15■□□□□ 0.18
PCDH17O14917 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms