Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPN9O14815 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPN9O14815 AP001094.4-201ENST00000579008 2176 ntBASIC17.89■□□□□ 0.45
CAPN9O14815 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 AC092053.1-201ENST00000605787 1936 ntBASIC17.88■□□□□ 0.45
CAPN9O14815 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.88■□□□□ 0.45
CAPN9O14815 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.88■□□□□ 0.45
CAPN9O14815 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CAPN9O14815 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.88■□□□□ 0.45
CAPN9O14815 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.88■□□□□ 0.45
CAPN9O14815 KRT18P13-201ENST00000400056 1290 ntBASIC17.88■□□□□ 0.45
CAPN9O14815 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.88■□□□□ 0.45
CAPN9O14815 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.88■□□□□ 0.45
CAPN9O14815 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.88■□□□□ 0.45
CAPN9O14815 RPL13AP23-201ENST00000480739 586 ntBASIC17.88■□□□□ 0.45
CAPN9O14815 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.88■□□□□ 0.45
CAPN9O14815 AC108751.1-201ENST00000490852 363 ntBASIC17.88■□□□□ 0.45
CAPN9O14815 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CAPN9O14815 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.88■□□□□ 0.45
CAPN9O14815 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.88■□□□□ 0.45
CAPN9O14815 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CAPN9O14815 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.88■□□□□ 0.45
CAPN9O14815 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CAPN9O14815 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.88■□□□□ 0.45
CAPN9O14815 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.88■□□□□ 0.45
CAPN9O14815 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.88■□□□□ 0.45
CAPN9O14815 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CAPN9O14815 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.88■□□□□ 0.45
CAPN9O14815 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN9O14815 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN9O14815 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CAPN9O14815 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CAPN9O14815 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN9O14815 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CAPN9O14815 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN9O14815 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.87■□□□□ 0.45
CAPN9O14815 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN9O14815 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.87■□□□□ 0.45
CAPN9O14815 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN9O14815 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN9O14815 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.87■□□□□ 0.45
CAPN9O14815 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
CAPN9O14815 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CAPN9O14815 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
CAPN9O14815 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CAPN9O14815 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN9O14815 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN9O14815 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CAPN9O14815 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN9O14815 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN9O14815 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CAPN9O14815 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN9O14815 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN9O14815 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN9O14815 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN9O14815 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN9O14815 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN9O14815 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN9O14815 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN9O14815 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
CAPN9O14815 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN9O14815 PAWRP1-201ENST00000451083 565 ntBASIC17.86■□□□□ 0.45
CAPN9O14815 AC108073.2-201ENST00000464002 357 ntBASIC17.86■□□□□ 0.45
CAPN9O14815 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN9O14815 MIR4751-201ENST00000578027 74 ntBASIC17.86■□□□□ 0.45
CAPN9O14815 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN9O14815 Z83851.2-201ENST00000609564 659 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms