Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144AA2RUR9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144AA2RUR9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
CCDC144AA2RUR9 AC092580.3-201ENST00000430932 139 ntBASIC24.05■■□□□ 1.44
CCDC144AA2RUR9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC24.05■■□□□ 1.44
CCDC144AA2RUR9 AP002490.2-201ENST00000524791 560 ntBASIC24.05■■□□□ 1.44
CCDC144AA2RUR9 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144AA2RUR9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC24.05■■□□□ 1.44
CCDC144AA2RUR9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC144AA2RUR9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144AA2RUR9 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144AA2RUR9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144AA2RUR9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC144AA2RUR9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
CCDC144AA2RUR9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144AA2RUR9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 HLA-H-201ENST00000383620 1096 ntBASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 BASP1P1-201ENST00000430708 665 ntBASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 RNA5SP421-201ENST00000516864 134 ntBASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 AP3S2-216ENST00000617003 1561 ntBASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC144AA2RUR9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 MIR4453-201ENST00000584019 89 ntBASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 AC007967.4-201ENST00000614700 386 ntBASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 AL645608.8-201ENST00000606034 2086 ntBASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 AL645728.1-201ENST00000366221 2101 ntBASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 AL391256.1-201ENST00000443260 1855 ntBASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC24.03■■□□□ 1.44
CCDC144AA2RUR9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC24.02■■□□□ 1.44
CCDC144AA2RUR9 FAM220BP-201ENST00000377689 816 ntBASIC24.02■■□□□ 1.44
CCDC144AA2RUR9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC24.02■■□□□ 1.44
CCDC144AA2RUR9 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC144AA2RUR9 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC24.02■■□□□ 1.44
CCDC144AA2RUR9 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC24.02■■□□□ 1.44
CCDC144AA2RUR9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC24.02■■□□□ 1.44
CCDC144AA2RUR9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CCDC144AA2RUR9 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC144AA2RUR9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC24.02■■□□□ 1.44
CCDC144AA2RUR9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC144AA2RUR9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC144AA2RUR9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC24.02■■□□□ 1.44
CCDC144AA2RUR9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC24.02■■□□□ 1.44
CCDC144AA2RUR9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC24.02■■□□□ 1.44
CCDC144AA2RUR9 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC144AA2RUR9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 IGHV3-42-201ENST00000520410 361 ntBASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 MIR4745-201ENST00000577608 62 ntBASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 AC018529.1-201ENST00000613063 361 ntBASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms