Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 BX842568.4-201ENST00000421222 227 ntBASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AC007967.2-201ENST00000432613 625 ntBASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AP002490.2-201ENST00000524791 560 ntBASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AC092865.5-201ENST00000545435 363 ntBASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AC004790.2-201ENST00000623588 572 ntBASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TOP3BP1-201ENST00000420768 1380 ntBASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 PCDHB17P-201ENST00000539533 2393 ntBASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AC129492.6-201ENST00000611383 1305 ntBASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms