Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 LINC01238-205ENST00000567549 1107 ntBASIC15.14■□□□□ 0.01
COPS3Q9UNS2 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 TP73-AS1-210ENST00000637775 1455 ntBASIC15.14■□□□□ 0.01
COPS3Q9UNS2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.14■□□□□ 0.01
COPS3Q9UNS2 AC148477.5-201ENST00000625164 1645 ntBASIC15.14■□□□□ 0.01
COPS3Q9UNS2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 ALOX12P2-203ENST00000570921 1945 ntBASIC15.13■□□□□ 0.01
COPS3Q9UNS2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 CHCHD2P8-201ENST00000429873 447 ntBASIC15.13■□□□□ 0.01
COPS3Q9UNS2 NUS1P1-201ENST00000446295 882 ntBASIC15.13■□□□□ 0.01
COPS3Q9UNS2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
COPS3Q9UNS2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.12■□□□□ 0.01
COPS3Q9UNS2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.12■□□□□ 0.01
COPS3Q9UNS2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COPS3Q9UNS2 AC016734.2-201ENST00000624325 1377 ntBASIC15.12■□□□□ 0.01
COPS3Q9UNS2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.12■□□□□ 0.01
COPS3Q9UNS2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COPS3Q9UNS2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
COPS3Q9UNS2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
COPS3Q9UNS2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.12■□□□□ 0.01
COPS3Q9UNS2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COPS3Q9UNS2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COPS3Q9UNS2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
COPS3Q9UNS2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COPS3Q9UNS2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
COPS3Q9UNS2 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.12■□□□□ 0.01
COPS3Q9UNS2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COPS3Q9UNS2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms