Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 FSCN1P1-201ENST00000568912 1481 ntBASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.36□□□□□ -0.11
UBQLN2Q9UHD9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 REXO1L11P-201ENST00000620964 1927 ntBASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 AL390955.1-201ENST00000428694 934 ntBASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 RBM17P1-201ENST00000453646 1190 ntBASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 Z85996.1-201ENST00000494644 937 ntBASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 DUTP2-201ENST00000519164 463 ntBASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 AC026271.3-201ENST00000571884 352 ntBASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 AL359258.3-201ENST00000622910 2331 ntBASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN2Q9UHD9 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 MIR1238-201ENST00000408483 83 ntBASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 FAM207BP-201ENST00000447172 505 ntBASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 SLC25A1P4-201ENST00000567977 778 ntBASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 OR2I1P-209ENST00000641730 5365 ntBASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 GRK6P1-201ENST00000400595 1711 ntBASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms