Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 AC067930.6-201ENST00000623257 4947 ntBASIC16.43■□□□□ 0.22
NDE1Q9NXR1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 MIR935-201ENST00000401179 91 ntBASIC16.43■□□□□ 0.22
NDE1Q9NXR1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 HLA-J-202ENST00000469281 1241 ntBASIC16.43■□□□□ 0.22
NDE1Q9NXR1 AC111152.3-201ENST00000569699 673 ntBASIC16.43■□□□□ 0.22
NDE1Q9NXR1 AC109462.3-201ENST00000573934 613 ntBASIC16.43■□□□□ 0.22
NDE1Q9NXR1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 AC019129.2-201ENST00000609837 1235 ntBASIC16.43■□□□□ 0.22
NDE1Q9NXR1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
NDE1Q9NXR1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 AP000525.1-201ENST00000608286 694 ntBASIC16.42■□□□□ 0.22
NDE1Q9NXR1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NDE1Q9NXR1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 ME2P1-201ENST00000426028 1970 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms