Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.68■□□□□ 0.42
HOMER3Q9NSC5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
HOMER3Q9NSC5 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.68■□□□□ 0.42
HOMER3Q9NSC5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
HOMER3Q9NSC5 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOMER3Q9NSC5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.68■□□□□ 0.42
HOMER3Q9NSC5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOMER3Q9NSC5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HOMER3Q9NSC5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOMER3Q9NSC5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 AC016734.2-201ENST00000624325 1377 ntBASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 AP005901.3-202ENST00000581653 237 ntBASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 AL513523.2-202ENST00000427283 2040 ntBASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOMER3Q9NSC5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 PKD1P5-201ENST00000532415 10291 ntBASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 LINC00895-201ENST00000629028 1637 ntBASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 DRAXINP1-201ENST00000437611 948 ntBASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 AP000867.4-201ENST00000641616 219 ntBASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOMER3Q9NSC5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 NUS1P1-201ENST00000446295 882 ntBASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 RN7SL850P-201ENST00000579959 291 ntBASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.65■□□□□ 0.42
HOMER3Q9NSC5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms