Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF3Q9NR81 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF3Q9NR81 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
ARHGEF3Q9NR81 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.93■□□□□ 0.46
ARHGEF3Q9NR81 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 GGTLC5P-201ENST00000617623 998 ntBASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 AC007064.4-201ENST00000637740 555 ntBASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF3Q9NR81 AL096828.2-201ENST00000567259 1965 ntBASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 AP002414.1-201ENST00000391405 1147 ntBASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 AC025678.2-201ENST00000562061 970 ntBASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 AC023141.13-201ENST00000604991 943 ntBASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 AC105020.1-201ENST00000435356 2205 ntBASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF3Q9NR81 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
ARHGEF3Q9NR81 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF3Q9NR81 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ARHGEF3Q9NR81 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF3Q9NR81 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF3Q9NR81 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF3Q9NR81 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF3Q9NR81 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ARHGEF3Q9NR81 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF3Q9NR81 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF3Q9NR81 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ARHGEF3Q9NR81 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ARHGEF3Q9NR81 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF3Q9NR81 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF3Q9NR81 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms