Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VAT1LQ9HCJ6 HTR5BP-201ENST00000430851 1154 ntBASIC19.58■□□□□ 0.72
VAT1LQ9HCJ6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.58■□□□□ 0.72
VAT1LQ9HCJ6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.58■□□□□ 0.72
VAT1LQ9HCJ6 MIR4515-201ENST00000584082 81 ntBASIC19.58■□□□□ 0.72
VAT1LQ9HCJ6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.58■□□□□ 0.72
VAT1LQ9HCJ6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.58■□□□□ 0.72
VAT1LQ9HCJ6 AL691403.2-201ENST00000618460 490 ntBASIC19.58■□□□□ 0.72
VAT1LQ9HCJ6 C20orf181-201ENST00000623918 480 ntBASIC19.58■□□□□ 0.72
VAT1LQ9HCJ6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.58■□□□□ 0.72
VAT1LQ9HCJ6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
VAT1LQ9HCJ6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VAT1LQ9HCJ6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 SLC22A20-204ENST00000530038 1673 ntBASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 FAM58CP-201ENST00000435741 640 ntBASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 AC005412.3-201ENST00000580309 715 ntBASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
VAT1LQ9HCJ6 AC012569.1-201ENST00000591191 1524 ntBASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 HMGA1P7-201ENST00000406908 502 ntBASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 AC124947.2-201ENST00000547118 1133 ntBASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 AL031432.2-201ENST00000566714 459 ntBASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 AL928711.1-201ENST00000570165 459 ntBASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 MIR4469-201ENST00000583919 79 ntBASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 KRT8P49-201ENST00000604166 1432 ntBASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.56■□□□□ 0.72
VAT1LQ9HCJ6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 AL353732.1-201ENST00000569618 1459 ntBASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 PCDHB17P-201ENST00000539533 2393 ntBASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 AP002472.1-201ENST00000577490 586 ntBASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 AC068137.2-201ENST00000605408 478 ntBASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAT1LQ9HCJ6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms