Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PC-208ENST00000529047 1607 ntTSL 3 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 AC002558.1-201ENST00000488906 803 ntBASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 AC004263.2-201ENST00000617183 678 ntBASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 DDT-203ENST00000403754 569 ntTSL 3 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 DDT-206ENST00000430101 573 ntTSL 2 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 NAPSB-206ENST00000562112 1266 ntBASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 FAM87A-204ENST00000613235 858 ntBASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 GXYLT1P4-201ENST00000613576 1192 ntBASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC11.38□□□□□ -0.59
SND1-IT1Q9HBX3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms