Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 AL031055.1-201ENST00000606362 631 ntBASIC15.15■□□□□ 0.02
ZNF407Q9C0G0 AL645608.8-201ENST00000606034 2086 ntBASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 AC092053.1-201ENST00000605787 1936 ntBASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF407Q9C0G0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 AC011467.4-201ENST00000594891 528 ntBASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms