Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM2Q9C040 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM2Q9C040 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM2Q9C040 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM2Q9C040 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM2Q9C040 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM2Q9C040 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM2Q9C040 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM2Q9C040 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM2Q9C040 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 AC079781.3-201ENST00000449110 356 ntBASIC15.6■□□□□ 0.09
TRIM2Q9C040 BX005266.1-201ENST00000473402 457 ntBASIC15.6■□□□□ 0.09
TRIM2Q9C040 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 AL160237.2-201ENST00000556165 472 ntBASIC15.6■□□□□ 0.09
TRIM2Q9C040 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM2Q9C040 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 RNF216P1-203ENST00000404404 2427 ntBASIC15.6■□□□□ 0.09
TRIM2Q9C040 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM2Q9C040 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 AL356309.3-201ENST00000624132 1934 ntBASIC15.6■□□□□ 0.09
TRIM2Q9C040 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM2Q9C040 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 PCDHA14-201ENST00000506751 2298 ntBASIC15.6■□□□□ 0.09
TRIM2Q9C040 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM2Q9C040 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM2Q9C040 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM2Q9C040 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
TRIM2Q9C040 PCDHB17P-201ENST00000539533 2393 ntBASIC15.6■□□□□ 0.09
TRIM2Q9C040 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRIM2Q9C040 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRIM2Q9C040 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRIM2Q9C040 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM2Q9C040 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRIM2Q9C040 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRIM2Q9C040 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRIM2Q9C040 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM2Q9C040 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM2Q9C040 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.59■□□□□ 0.09
TRIM2Q9C040 AC009078.2-202ENST00000463353 338 ntBASIC15.59■□□□□ 0.09
TRIM2Q9C040 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM2Q9C040 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM2Q9C040 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 NKAPP1-205ENST00000585790 367 ntBASIC15.59■□□□□ 0.09
TRIM2Q9C040 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM2Q9C040 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TRIM2Q9C040 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRIM2Q9C040 AL590787.1-201ENST00000568856 1315 ntBASIC15.59■□□□□ 0.09
TRIM2Q9C040 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM2Q9C040 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM2Q9C040 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM2Q9C040 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.58■□□□□ 0.09
TRIM2Q9C040 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
TRIM2Q9C040 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM2Q9C040 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM2Q9C040 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM2Q9C040 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
TRIM2Q9C040 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.58■□□□□ 0.09
TRIM2Q9C040 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.58■□□□□ 0.08
TRIM2Q9C040 AC007326.2-201ENST00000624224 7579 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms