Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 TUBB1P1-201ENST00000503144 1300 ntBASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 AL023806.1-201ENST00000603994 1649 ntBASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 MIR1247-201ENST00000408206 136 ntBASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 GPAA1P2-201ENST00000417923 928 ntBASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 HLA-V-204ENST00000476601 1289 ntBASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 AC135586.1-201ENST00000539323 574 ntBASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 HNRNPUP1-201ENST00000554987 333 ntBASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 AP000842.3-202ENST00000569238 1080 ntBASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 AL161938.1-201ENST00000569833 2180 ntBASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP3Q9BZ76 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 AL133373.2-201ENST00000623187 2828 ntBASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 IGHJ2P-201ENST00000454480 60 ntBASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms