Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 AC008894.3-201ENST00000624324 3103 ntBASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 AL645608.8-201ENST00000606034 2086 ntBASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 GPX1P2-201ENST00000429271 606 ntBASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 AL513480.1-201ENST00000451731 511 ntBASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 AC139530.3-201ENST00000620344 690 ntBASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP3Q9BWW4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 AC116353.5-201ENST00000638148 1699 ntBASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 MCCD1P2-201ENST00000423228 335 ntBASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 RHOQP3-201ENST00000437982 621 ntBASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 KRT19P2-202ENST00000557173 1012 ntBASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 PDPK2P-202ENST00000562415 1191 ntBASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 AL513190.1-201ENST00000621254 727 ntBASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 AC092865.6-201ENST00000642101 219 ntBASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP3Q9BWW4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms