Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.67■□□□□ 0.42
SMOQ99835 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.67■□□□□ 0.42
SMOQ99835 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.67■□□□□ 0.42
SMOQ99835 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SMOQ99835 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.67■□□□□ 0.42
SMOQ99835 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SMOQ99835 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.67■□□□□ 0.42
SMOQ99835 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SMOQ99835 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMOQ99835 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.66■□□□□ 0.42
SMOQ99835 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMOQ99835 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SMOQ99835 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SMOQ99835 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMOQ99835 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMOQ99835 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMOQ99835 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SMOQ99835 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SMOQ99835 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMOQ99835 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMOQ99835 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMOQ99835 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMOQ99835 RPS8P6-201ENST00000426177 609 ntBASIC17.66■□□□□ 0.42
SMOQ99835 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.66■□□□□ 0.42
SMOQ99835 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMOQ99835 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
SMOQ99835 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.66■□□□□ 0.42
SMOQ99835 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SMOQ99835 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SMOQ99835 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SMOQ99835 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMOQ99835 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.66■□□□□ 0.42
SMOQ99835 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.66■□□□□ 0.42
SMOQ99835 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.66■□□□□ 0.42
SMOQ99835 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMOQ99835 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
SMOQ99835 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SMOQ99835 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMOQ99835 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SMOQ99835 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.66■□□□□ 0.42
SMOQ99835 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMOQ99835 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SMOQ99835 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SMOQ99835 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SMOQ99835 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SMOQ99835 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SMOQ99835 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 RNF216P1-203ENST00000404404 2427 ntBASIC17.65■□□□□ 0.42
SMOQ99835 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 AL355306.1-201ENST00000415580 579 ntBASIC17.65■□□□□ 0.42
SMOQ99835 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
SMOQ99835 AP006288.1-201ENST00000446065 395 ntBASIC17.65■□□□□ 0.42
SMOQ99835 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SMOQ99835 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SMOQ99835 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 MIR3909-201ENST00000579518 119 ntBASIC17.65■□□□□ 0.42
SMOQ99835 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.65■□□□□ 0.42
SMOQ99835 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.65■□□□□ 0.42
SMOQ99835 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.65■□□□□ 0.42
SMOQ99835 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.65■□□□□ 0.42
SMOQ99835 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.65■□□□□ 0.42
SMOQ99835 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.65■□□□□ 0.42
SMOQ99835 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMOQ99835 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SMOQ99835 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SMOQ99835 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SMOQ99835 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SMOQ99835 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.64■□□□□ 0.41
SMOQ99835 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.64■□□□□ 0.41
SMOQ99835 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMOQ99835 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMOQ99835 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMOQ99835 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMOQ99835 PMS2P4-201ENST00000412466 1052 ntBASIC17.64■□□□□ 0.41
SMOQ99835 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMOQ99835 AL671277.1-201ENST00000429656 993 ntBASIC17.64■□□□□ 0.41
SMOQ99835 DNAJB3-202ENST00000449667 1266 ntBASIC17.64■□□□□ 0.41
SMOQ99835 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms