Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE1Q99829 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE1Q99829 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.93■□□□□ 0.3
CPNE1Q99829 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE1Q99829 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CPNE1Q99829 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE1Q99829 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.93■□□□□ 0.3
CPNE1Q99829 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.93■□□□□ 0.3
CPNE1Q99829 KRT16P4-201ENST00000453883 522 ntBASIC16.93■□□□□ 0.3
CPNE1Q99829 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.93■□□□□ 0.3
CPNE1Q99829 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.93■□□□□ 0.3
CPNE1Q99829 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CPNE1Q99829 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE1Q99829 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE1Q99829 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE1Q99829 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE1Q99829 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.93■□□□□ 0.3
CPNE1Q99829 ME2P1-201ENST00000426028 1970 ntBASIC16.93■□□□□ 0.3
CPNE1Q99829 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE1Q99829 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.93■□□□□ 0.3
CPNE1Q99829 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE1Q99829 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE1Q99829 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE1Q99829 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
CPNE1Q99829 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.93■□□□□ 0.3
CPNE1Q99829 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.92■□□□□ 0.3
CPNE1Q99829 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 AC092364.2-201ENST00000596710 2692 ntBASIC16.92■□□□□ 0.3
CPNE1Q99829 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE1Q99829 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CPNE1Q99829 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CPNE1Q99829 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
CPNE1Q99829 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE1Q99829 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.92■□□□□ 0.3
CPNE1Q99829 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
CPNE1Q99829 AC092119.3-201ENST00000612618 583 ntBASIC16.92■□□□□ 0.3
CPNE1Q99829 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.92■□□□□ 0.3
CPNE1Q99829 NCF1C-201ENST00000438382 1427 ntBASIC16.92■□□□□ 0.3
CPNE1Q99829 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE1Q99829 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.92■□□□□ 0.3
CPNE1Q99829 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.92■□□□□ 0.3
CPNE1Q99829 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CPNE1Q99829 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CPNE1Q99829 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CPNE1Q99829 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE1Q99829 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE1Q99829 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.91■□□□□ 0.3
CPNE1Q99829 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.91■□□□□ 0.3
CPNE1Q99829 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.91■□□□□ 0.3
CPNE1Q99829 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CPNE1Q99829 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CPNE1Q99829 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.91■□□□□ 0.3
CPNE1Q99829 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CPNE1Q99829 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.91■□□□□ 0.3
CPNE1Q99829 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.91■□□□□ 0.3
CPNE1Q99829 AP001269.4-201ENST00000609611 512 ntBASIC16.91■□□□□ 0.3
CPNE1Q99829 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CPNE1Q99829 AL358472.4-201ENST00000633140 710 ntBASIC16.91■□□□□ 0.3
CPNE1Q99829 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CPNE1Q99829 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CPNE1Q99829 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.91■□□□□ 0.3
CPNE1Q99829 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CPNE1Q99829 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE1Q99829 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
CPNE1Q99829 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CPNE1Q99829 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE1Q99829 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE1Q99829 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms