Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC27.49■■□□□ 1.99
IFT140Q96RY7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
IFT140Q96RY7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC27.49■■□□□ 1.99
IFT140Q96RY7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
IFT140Q96RY7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC27.49■■□□□ 1.99
IFT140Q96RY7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC27.49■■□□□ 1.99
IFT140Q96RY7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC27.49■■□□□ 1.99
IFT140Q96RY7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
IFT140Q96RY7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC27.49■■□□□ 1.99
IFT140Q96RY7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC27.49■■□□□ 1.99
IFT140Q96RY7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC27.49■■□□□ 1.99
IFT140Q96RY7 AC024267.1-201ENST00000582320 895 ntBASIC27.49■■□□□ 1.99
IFT140Q96RY7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
IFT140Q96RY7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC27.49■■□□□ 1.99
IFT140Q96RY7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC27.49■■□□□ 1.99
IFT140Q96RY7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
IFT140Q96RY7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
IFT140Q96RY7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
IFT140Q96RY7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC27.48■■□□□ 1.99
IFT140Q96RY7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
IFT140Q96RY7 RPL7P3-201ENST00000441388 714 ntBASIC27.48■■□□□ 1.99
IFT140Q96RY7 AC007551.1-201ENST00000457394 519 ntBASIC27.48■■□□□ 1.99
IFT140Q96RY7 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC27.48■■□□□ 1.99
IFT140Q96RY7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC27.48■■□□□ 1.99
IFT140Q96RY7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC27.48■■□□□ 1.99
IFT140Q96RY7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
IFT140Q96RY7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC27.48■■□□□ 1.99
IFT140Q96RY7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
IFT140Q96RY7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
IFT140Q96RY7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
IFT140Q96RY7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
IFT140Q96RY7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
IFT140Q96RY7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
IFT140Q96RY7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
IFT140Q96RY7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
IFT140Q96RY7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 COG4-212ENST00000564653 590 ntTSL 5 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
IFT140Q96RY7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
IFT140Q96RY7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
IFT140Q96RY7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC27.47■■□□□ 1.99
IFT140Q96RY7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
IFT140Q96RY7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC27.46■■□□□ 1.99
IFT140Q96RY7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
IFT140Q96RY7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
IFT140Q96RY7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC27.46■■□□□ 1.99
IFT140Q96RY7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC27.46■■□□□ 1.99
IFT140Q96RY7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC27.46■■□□□ 1.99
IFT140Q96RY7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC27.46■■□□□ 1.99
IFT140Q96RY7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC27.46■■□□□ 1.99
IFT140Q96RY7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC27.46■■□□□ 1.99
IFT140Q96RY7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
IFT140Q96RY7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC27.46■■□□□ 1.99
IFT140Q96RY7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC27.46■■□□□ 1.99
IFT140Q96RY7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC27.46■■□□□ 1.99
IFT140Q96RY7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
IFT140Q96RY7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
IFT140Q96RY7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
IFT140Q96RY7 AL442647.2-201ENST00000429864 857 ntBASIC27.45■■□□□ 1.99
IFT140Q96RY7 AC093724.1-201ENST00000448659 1027 ntBASIC27.45■■□□□ 1.99
IFT140Q96RY7 PFN1P12-201ENST00000455938 534 ntBASIC27.45■■□□□ 1.99
IFT140Q96RY7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC27.45■■□□□ 1.99
IFT140Q96RY7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.99
IFT140Q96RY7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC27.45■■□□□ 1.99
IFT140Q96RY7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC27.45■■□□□ 1.99
IFT140Q96RY7 AP000812.2-201ENST00000538934 718 ntBASIC27.45■■□□□ 1.99
IFT140Q96RY7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC27.45■■□□□ 1.99
IFT140Q96RY7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC27.45■■□□□ 1.99
IFT140Q96RY7 AL022328.1-201ENST00000610050 478 ntBASIC27.45■■□□□ 1.99
IFT140Q96RY7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
IFT140Q96RY7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
IFT140Q96RY7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
IFT140Q96RY7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC27.45■■□□□ 1.98
IFT140Q96RY7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
IFT140Q96RY7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
IFT140Q96RY7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
IFT140Q96RY7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
IFT140Q96RY7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC27.44■■□□□ 1.98
IFT140Q96RY7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
IFT140Q96RY7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC27.44■■□□□ 1.98
IFT140Q96RY7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC27.44■■□□□ 1.98
IFT140Q96RY7 PC-204ENST00000524491 1714 ntTSL 2 BASIC27.44■■□□□ 1.98
IFT140Q96RY7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
IFT140Q96RY7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
IFT140Q96RY7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms