Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 AC091167.2-201ENST00000579581 588 ntBASIC17.41■□□□□ 0.38
RPRD1AQ96P16 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 AC023511.2-201ENST00000618803 211 ntBASIC17.41■□□□□ 0.38
RPRD1AQ96P16 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPRD1AQ96P16 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 YBX2P1-201ENST00000394192 760 ntBASIC17.4■□□□□ 0.38
RPRD1AQ96P16 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 MPDU1-223ENST00000582151 728 ntBASIC17.4■□□□□ 0.38
RPRD1AQ96P16 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
RPRD1AQ96P16 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RPRD1AQ96P16 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RPRD1AQ96P16 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RPRD1AQ96P16 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RPRD1AQ96P16 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RPRD1AQ96P16 SLC22A20-204ENST00000530038 1673 ntBASIC17.39■□□□□ 0.37
RPRD1AQ96P16 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 AC012569.1-201ENST00000591191 1524 ntBASIC17.39■□□□□ 0.37
RPRD1AQ96P16 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 KRT18P13-201ENST00000400056 1290 ntBASIC17.39■□□□□ 0.37
RPRD1AQ96P16 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 AC074386.1-202ENST00000463561 864 ntBASIC17.39■□□□□ 0.37
RPRD1AQ96P16 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 MIR4515-201ENST00000584082 81 ntBASIC17.39■□□□□ 0.37
RPRD1AQ96P16 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPRD1AQ96P16 MTDHP5-201ENST00000598980 586 ntBASIC17.39■□□□□ 0.37
RPRD1AQ96P16 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms