Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
NECTIN4Q96NY8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
NECTIN4Q96NY8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
NECTIN4Q96NY8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 API5-211ENST00000534695 560 ntTSL 5 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 AC009407.1-201ENST00000568958 598 ntBASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 TEX28P1-201ENST00000613479 1221 ntBASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 TEX28P2-201ENST00000617764 1221 ntBASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 AL391825.1-201ENST00000457671 1364 ntBASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NECTIN4Q96NY8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 AC012313.1-201ENST00000593393 3059 ntBASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 EGFEM1P-202ENST00000431685 1563 ntBASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 AC087499.6-201ENST00000411576 835 ntBASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 GIMAP3P-201ENST00000495150 836 ntBASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 AC008738.7-201ENST00000609744 511 ntBASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECTIN4Q96NY8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 AP006294.1-201ENST00000415407 339 ntBASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 DFFBP1-201ENST00000433250 979 ntBASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 PRYP6-201ENST00000514804 343 ntBASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.37■□□□□ 0.37
NECTIN4Q96NY8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms