Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF31Q96EP0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF31Q96EP0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF31Q96EP0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RNF31Q96EP0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF31Q96EP0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.36■□□□□ 0.21
RNF31Q96EP0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF31Q96EP0 AC106028.4-201ENST00000614509 607 ntBASIC16.36■□□□□ 0.21
RNF31Q96EP0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF31Q96EP0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
RNF31Q96EP0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 AC108860.2-201ENST00000562760 2183 ntBASIC16.36■□□□□ 0.21
RNF31Q96EP0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RNF31Q96EP0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF31Q96EP0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RNF31Q96EP0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF31Q96EP0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 AP002414.1-201ENST00000391405 1147 ntBASIC16.35■□□□□ 0.21
RNF31Q96EP0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.35■□□□□ 0.21
RNF31Q96EP0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.35■□□□□ 0.21
RNF31Q96EP0 PRSS29P-201ENST00000440800 595 ntBASIC16.35■□□□□ 0.21
RNF31Q96EP0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RNF31Q96EP0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RNF31Q96EP0 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF31Q96EP0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF31Q96EP0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.35■□□□□ 0.21
RNF31Q96EP0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF31Q96EP0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RNF31Q96EP0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RNF31Q96EP0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF31Q96EP0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF31Q96EP0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF31Q96EP0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF31Q96EP0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF31Q96EP0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF31Q96EP0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF31Q96EP0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF31Q96EP0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF31Q96EP0 AD000864.1-201ENST00000624076 2295 ntBASIC16.34■□□□□ 0.21
RNF31Q96EP0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF31Q96EP0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF31Q96EP0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF31Q96EP0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
RNF31Q96EP0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RNF31Q96EP0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RNF31Q96EP0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF31Q96EP0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF31Q96EP0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF31Q96EP0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF31Q96EP0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF31Q96EP0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF31Q96EP0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RNF31Q96EP0 AC079781.4-201ENST00000641908 219 ntBASIC16.34■□□□□ 0.21
RNF31Q96EP0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF31Q96EP0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF31Q96EP0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF31Q96EP0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF31Q96EP0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF31Q96EP0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF31Q96EP0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RNF31Q96EP0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.33■□□□□ 0.21
RNF31Q96EP0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RNF31Q96EP0 LINC00304-203ENST00000565008 1864 ntBASIC16.33■□□□□ 0.21
RNF31Q96EP0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF31Q96EP0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
RNF31Q96EP0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF31Q96EP0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RNF31Q96EP0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms