Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 AL671277.1-201ENST00000429656 993 ntBASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 MIR3197-201ENST00000582241 73 ntBASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6V0A1Q93050 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 AL355306.1-201ENST00000415580 579 ntBASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 FAM86C2P-203ENST00000528684 1004 ntBASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 AC025678.2-201ENST00000562061 970 ntBASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 MPDU1-223ENST00000582151 728 ntBASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 AC099522.2-201ENST00000607001 744 ntBASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 AC026120.1-201ENST00000611536 926 ntBASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 AP001350.2-201ENST00000625104 1094 ntBASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP6V0A1Q93050 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 SLC22A20-204ENST00000530038 1673 ntBASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 AC005332.8-201ENST00000622750 2735 ntBASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 AC109322.1-201ENST00000524499 1264 ntBASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 AC087641.1-201ENST00000557561 1021 ntBASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 AC011467.4-201ENST00000594891 528 ntBASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 AC093512.1-201ENST00000617969 520 ntBASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 LINC00628-201ENST00000628516 1289 ntBASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ATP6V0A1Q93050 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms