Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC23.18■■□□□ 1.3
PTPRUQ92729 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC23.18■■□□□ 1.3
PTPRUQ92729 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC23.18■■□□□ 1.3
PTPRUQ92729 IMPDH1P4-201ENST00000445028 1534 ntBASIC23.18■■□□□ 1.3
PTPRUQ92729 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC23.18■■□□□ 1.3
PTPRUQ92729 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PTPRUQ92729 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
PTPRUQ92729 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTPRUQ92729 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTPRUQ92729 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PTPRUQ92729 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTPRUQ92729 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
PTPRUQ92729 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PTPRUQ92729 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PTPRUQ92729 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTPRUQ92729 SPDYE17-201ENST00000412399 783 ntBASIC23.17■■□□□ 1.3
PTPRUQ92729 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC23.17■■□□□ 1.3
PTPRUQ92729 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC23.17■■□□□ 1.3
PTPRUQ92729 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC23.17■■□□□ 1.3
PTPRUQ92729 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PTPRUQ92729 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC23.17■■□□□ 1.3
PTPRUQ92729 AC092552.1-201ENST00000547243 906 ntBASIC23.17■■□□□ 1.3
PTPRUQ92729 NAA38-207ENST00000576861 556 ntTSL 3 BASIC23.17■■□□□ 1.3
PTPRUQ92729 AC061975.2-201ENST00000581722 295 ntBASIC23.17■■□□□ 1.3
PTPRUQ92729 AC008735.3-201ENST00000596646 500 ntBASIC23.17■■□□□ 1.3
PTPRUQ92729 MIR6775-201ENST00000617557 69 ntBASIC23.17■■□□□ 1.3
PTPRUQ92729 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTPRUQ92729 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC23.17■■□□□ 1.3
PTPRUQ92729 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC23.17■■□□□ 1.3
PTPRUQ92729 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTPRUQ92729 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC23.17■■□□□ 1.3
PTPRUQ92729 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PTPRUQ92729 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC23.17■■□□□ 1.3
PTPRUQ92729 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTPRUQ92729 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC23.17■■□□□ 1.3
PTPRUQ92729 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTPRUQ92729 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTPRUQ92729 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC23.17■■□□□ 1.3
PTPRUQ92729 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTPRUQ92729 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PTPRUQ92729 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC23.17■■□□□ 1.3
PTPRUQ92729 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PTPRUQ92729 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC23.17■■□□□ 1.3
PTPRUQ92729 PC-204ENST00000524491 1714 ntTSL 2 BASIC23.17■■□□□ 1.3
PTPRUQ92729 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTPRUQ92729 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
PTPRUQ92729 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PTPRUQ92729 FAM86MP-201ENST00000340703 885 ntBASIC23.16■■□□□ 1.3
PTPRUQ92729 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC23.16■■□□□ 1.3
PTPRUQ92729 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 MYCLP2-201ENST00000449268 967 ntBASIC23.16■■□□□ 1.3
PTPRUQ92729 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC23.16■■□□□ 1.3
PTPRUQ92729 PACS1-203ENST00000524815 628 ntTSL 4 BASIC23.16■■□□□ 1.3
PTPRUQ92729 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PTPRUQ92729 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC23.16■■□□□ 1.3
PTPRUQ92729 MIR4525-201ENST00000580000 75 ntBASIC23.16■■□□□ 1.3
PTPRUQ92729 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC23.16■■□□□ 1.3
PTPRUQ92729 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC23.16■■□□□ 1.3
PTPRUQ92729 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 AC013467.2-201ENST00000605472 835 ntBASIC23.16■■□□□ 1.3
PTPRUQ92729 WFDC1-204ENST00000613603 549 ntBASIC23.16■■□□□ 1.3
PTPRUQ92729 COX11-210ENST00000639671 696 ntBASIC23.16■■□□□ 1.3
PTPRUQ92729 AL033527.5-202ENST00000641632 1098 ntBASIC23.16■■□□□ 1.3
PTPRUQ92729 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC23.16■■□□□ 1.3
PTPRUQ92729 PKD1P6-201ENST00000343738 4769 ntBASIC23.16■■□□□ 1.3
PTPRUQ92729 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
PTPRUQ92729 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC23.16■■□□□ 1.3
PTPRUQ92729 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPRUQ92729 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC23.16■■□□□ 1.3
PTPRUQ92729 TPRX2P-201ENST00000535362 881 ntBASIC23.16■■□□□ 1.3
PTPRUQ92729 AC123567.1-201ENST00000548294 1261 ntBASIC23.16■■□□□ 1.3
PTPRUQ92729 WNT11-204ENST00000621122 789 ntTSL 5 BASIC23.16■■□□□ 1.3
PTPRUQ92729 AL109936.8-201ENST00000641772 604 ntBASIC23.16■■□□□ 1.3
PTPRUQ92729 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PTPRUQ92729 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTPRUQ92729 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PTPRUQ92729 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PTPRUQ92729 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC23.15■■□□□ 1.3
PTPRUQ92729 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC23.15■■□□□ 1.3
PTPRUQ92729 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PTPRUQ92729 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PTPRUQ92729 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PTPRUQ92729 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTPRUQ92729 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.15■■□□□ 1.3
PTPRUQ92729 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTPRUQ92729 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms