Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 AC105917.1-201ENST00000506637 2539 ntBASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 NSUN5P1-202ENST00000421140 1535 ntBASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 NSUN5P2-203ENST00000457352 1529 ntBASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 AL031133.1-201ENST00000406807 723 ntBASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 DRAXINP1-201ENST00000437611 948 ntBASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 KRT17P6-201ENST00000453795 1220 ntBASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 AC073592.4-201ENST00000623827 446 ntBASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A1Q8WWI5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 KRT18P1-202ENST00000452408 1331 ntBASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 AC005332.1-201ENST00000577698 1310 ntBASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 TPSP2-201ENST00000561760 610 ntBASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 AC114341.1-201ENST00000618070 349 ntBASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SLC44A1Q8WWI5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 IGHV3-47-201ENST00000425060 335 ntBASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC44A1Q8WWI5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms