Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC27.03■■□□□ 1.92
CHMP7Q8WUX9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC27.03■■□□□ 1.92
CHMP7Q8WUX9 AC233724.13-201ENST00000598383 410 ntBASIC27.03■■□□□ 1.92
CHMP7Q8WUX9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC27.03■■□□□ 1.92
CHMP7Q8WUX9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
CHMP7Q8WUX9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
CHMP7Q8WUX9 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC27.03■■□□□ 1.92
CHMP7Q8WUX9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC27.03■■□□□ 1.92
CHMP7Q8WUX9 AL139099.5-201ENST00000635274 300 ntBASIC27.03■■□□□ 1.92
CHMP7Q8WUX9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC27.03■■□□□ 1.92
CHMP7Q8WUX9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC27.03■■□□□ 1.92
CHMP7Q8WUX9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 KLF2P4-201ENST00000451959 1225 ntBASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 AC108725.1-201ENST00000495472 409 ntBASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHMP7Q8WUX9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC27.01■■□□□ 1.92
CHMP7Q8WUX9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
CHMP7Q8WUX9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 RNA5SP412-201ENST00000516234 123 ntBASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 ARL16-210ENST00000574938 751 ntTSL 2 BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP7Q8WUX9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC27■■□□□ 1.91
CHMP7Q8WUX9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
CHMP7Q8WUX9 AL021920.2-201ENST00000624828 1351 ntBASIC27■■□□□ 1.91
CHMP7Q8WUX9 AC138028.4-201ENST00000564984 1845 ntBASIC27■■□□□ 1.91
CHMP7Q8WUX9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC27■■□□□ 1.91
CHMP7Q8WUX9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHMP7Q8WUX9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHMP7Q8WUX9 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC27■■□□□ 1.91
CHMP7Q8WUX9 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC27■■□□□ 1.91
CHMP7Q8WUX9 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC27■■□□□ 1.91
CHMP7Q8WUX9 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC27■■□□□ 1.91
CHMP7Q8WUX9 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC27■■□□□ 1.91
CHMP7Q8WUX9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC27■■□□□ 1.91
CHMP7Q8WUX9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC27■■□□□ 1.91
CHMP7Q8WUX9 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC27■■□□□ 1.91
CHMP7Q8WUX9 AC092337.1-201ENST00000568699 1129 ntBASIC27■■□□□ 1.91
CHMP7Q8WUX9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC27■■□□□ 1.91
CHMP7Q8WUX9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC27■■□□□ 1.91
CHMP7Q8WUX9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC27■■□□□ 1.91
CHMP7Q8WUX9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC27■■□□□ 1.91
CHMP7Q8WUX9 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC27■■□□□ 1.91
CHMP7Q8WUX9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC27■■□□□ 1.91
CHMP7Q8WUX9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
CHMP7Q8WUX9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHMP7Q8WUX9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
CHMP7Q8WUX9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHMP7Q8WUX9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CHMP7Q8WUX9 AC120498.9-201ENST00000339021 3867 ntBASIC26.99■■□□□ 1.91
CHMP7Q8WUX9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC26.99■■□□□ 1.91
CHMP7Q8WUX9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC26.99■■□□□ 1.91
CHMP7Q8WUX9 AGER-214ENST00000538695 487 ntTSL 2 BASIC26.99■■□□□ 1.91
CHMP7Q8WUX9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHMP7Q8WUX9 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CHMP7Q8WUX9 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CHMP7Q8WUX9 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC26.99■■□□□ 1.91
CHMP7Q8WUX9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
CHMP7Q8WUX9 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
CHMP7Q8WUX9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC26.98■■□□□ 1.91
CHMP7Q8WUX9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHMP7Q8WUX9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
CHMP7Q8WUX9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC26.98■■□□□ 1.91
CHMP7Q8WUX9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms