Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CFAP43Q8NDM7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
CFAP43Q8NDM7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CFAP43Q8NDM7 SLC9A3P2-201ENST00000447821 2021 ntBASIC26.08■■□□□ 1.77
CFAP43Q8NDM7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 AC112492.5-201ENST00000421897 457 ntBASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 AC018529.1-201ENST00000613063 361 ntBASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CFAP43Q8NDM7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 DGCR5-201ENST00000399539 862 ntBASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 ZNF890P-202ENST00000530367 1156 ntBASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 AL080243.2-201ENST00000418783 582 ntBASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC26.06■■□□□ 1.76
CFAP43Q8NDM7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 AC141586.5-201ENST00000624546 2050 ntBASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CFAP43Q8NDM7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 BANF1P1-201ENST00000553684 263 ntBASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 AC104794.3-201ENST00000566840 1248 ntBASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 AC009407.1-201ENST00000568958 598 ntBASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 AL391825.1-201ENST00000457671 1364 ntBASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 AL645608.8-201ENST00000606034 2086 ntBASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
CFAP43Q8NDM7 MIR658-201ENST00000385210 100 ntBASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms