Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC155Q8N6L0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 AL031432.2-201ENST00000566714 459 ntBASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 AL928711.1-201ENST00000570165 459 ntBASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC155Q8N6L0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 AC025580.3-201ENST00000617932 1424 ntBASIC19.16■□□□□ 0.66
CCDC155Q8N6L0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC155Q8N6L0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
CCDC155Q8N6L0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC155Q8N6L0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms